Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.43□□□□□ -0.1
Nkx2-2P42586 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Nkx2-2P42586 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.42□□□□□ -0.1
Nkx2-2P42586 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.42□□□□□ -0.1
Nkx2-2P42586 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-2P42586 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Nkx2-2P42586 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.42□□□□□ -0.1
Nkx2-2P42586 Gm19164-201ENSMUST00000210667 640 ntBASIC14.42□□□□□ -0.1
Nkx2-2P42586 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.42□□□□□ -0.1
Nkx2-2P42586 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-2P42586 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Nkx2-2P42586 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.41□□□□□ -0.1
Nkx2-2P42586 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.41□□□□□ -0.1
Nkx2-2P42586 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Nkx2-2P42586 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms