Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Abca1P41233 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Abca1P41233 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.09□□□□□ -0.31
Abca1P41233 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Abca1P41233 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Abca1P41233 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Abca1P41233 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Abca1P41233 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Abca1P41233 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Abca1P41233 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Abca1P41233 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Abca1P41233 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Abca1P41233 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Abca1P41233 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Abca1P41233 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Abca1P41233 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.09□□□□□ -0.31
Abca1P41233 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Abca1P41233 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.09□□□□□ -0.31
Abca1P41233 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Abca1P41233 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Abca1P41233 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Abca1P41233 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Abca1P41233 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Abca1P41233 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Abca1P41233 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Abca1P41233 Gm15920-201ENSMUST00000118998 402 ntBASIC13.08□□□□□ -0.32
Abca1P41233 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.08□□□□□ -0.32
Abca1P41233 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Abca1P41233 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Abca1P41233 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Abca1P41233 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.08□□□□□ -0.32
Abca1P41233 AC090659.1-201ENSMUST00000224334 768 ntBASIC13.08□□□□□ -0.32
Abca1P41233 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
Abca1P41233 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Abca1P41233 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.08□□□□□ -0.32
Abca1P41233 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Abca1P41233 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Abca1P41233 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Abca1P41233 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Abca1P41233 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Abca1P41233 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.08□□□□□ -0.32
Abca1P41233 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Abca1P41233 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.08□□□□□ -0.32
Abca1P41233 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Abca1P41233 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.08□□□□□ -0.32
Abca1P41233 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Abca1P41233 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Abca1P41233 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.08□□□□□ -0.32
Abca1P41233 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Abca1P41233 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.07□□□□□ -0.32
Abca1P41233 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Abca1P41233 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Abca1P41233 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.07□□□□□ -0.32
Abca1P41233 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Abca1P41233 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Abca1P41233 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Abca1P41233 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
Abca1P41233 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Abca1P41233 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Abca1P41233 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Abca1P41233 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Abca1P41233 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Abca1P41233 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Abca1P41233 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Abca1P41233 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.07□□□□□ -0.32
Abca1P41233 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Abca1P41233 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Abca1P41233 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.07□□□□□ -0.32
Abca1P41233 Chchd1-203ENSMUST00000224633 557 ntBASIC13.07□□□□□ -0.32
Abca1P41233 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Abca1P41233 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Abca1P41233 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Abca1P41233 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Abca1P41233 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Abca1P41233 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Abca1P41233 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Abca1P41233 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Abca1P41233 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Abca1P41233 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Abca1P41233 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Abca1P41233 Gm11025-201ENSMUST00000140773 466 ntBASIC13.06□□□□□ -0.32
Abca1P41233 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.06□□□□□ -0.32
Abca1P41233 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Abca1P41233 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Abca1P41233 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Abca1P41233 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.06□□□□□ -0.32
Abca1P41233 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Abca1P41233 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Abca1P41233 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Abca1P41233 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Abca1P41233 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Abca1P41233 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Abca1P41233 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Abca1P41233 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.06□□□□□ -0.32
Abca1P41233 Gm11780-201ENSMUST00000136880 516 ntBASIC13.06□□□□□ -0.32
Abca1P41233 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.06□□□□□ -0.32
Abca1P41233 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Abca1P41233 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.06□□□□□ -0.32
Abca1P41233 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.06□□□□□ -0.32
Abca1P41233 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms