Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Foxa1P35582 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.57□□□□□ -0.08
Foxa1P35582 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Foxa1P35582 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Foxa1P35582 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Foxa1P35582 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxa1P35582 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Foxa1P35582 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Foxa1P35582 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.56□□□□□ -0.08
Foxa1P35582 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxa1P35582 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxa1P35582 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxa1P35582 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Foxa1P35582 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.56□□□□□ -0.08
Foxa1P35582 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxa1P35582 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.56□□□□□ -0.08
Foxa1P35582 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxa1P35582 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxa1P35582 Dancr-204ENSMUST00000132389 2347 ntBASIC14.56□□□□□ -0.08
Foxa1P35582 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxa1P35582 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxa1P35582 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxa1P35582 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxa1P35582 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxa1P35582 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Foxa1P35582 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Foxa1P35582 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxa1P35582 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxa1P35582 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Foxa1P35582 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Foxa1P35582 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Foxa1P35582 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Foxa1P35582 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Foxa1P35582 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.55□□□□□ -0.08
Foxa1P35582 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Foxa1P35582 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Foxa1P35582 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Foxa1P35582 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Foxa1P35582 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Foxa1P35582 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Foxa1P35582 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Foxa1P35582 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.55□□□□□ -0.08
Foxa1P35582 Gm27459-201ENSMUST00000184860 107 ntBASIC14.55□□□□□ -0.08
Foxa1P35582 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.55□□□□□ -0.08
Foxa1P35582 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC14.55□□□□□ -0.08
Foxa1P35582 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC14.55□□□□□ -0.08
Foxa1P35582 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Foxa1P35582 AC117588.1-201ENSMUST00000228510 999 ntBASIC14.55□□□□□ -0.08
Foxa1P35582 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Foxa1P35582 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Foxa1P35582 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Foxa1P35582 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Foxa1P35582 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.55□□□□□ -0.08
Foxa1P35582 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Foxa1P35582 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.55□□□□□ -0.08
Foxa1P35582 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Foxa1P35582 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.55□□□□□ -0.08
Foxa1P35582 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Foxa1P35582 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Foxa1P35582 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Foxa1P35582 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Foxa1P35582 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Foxa1P35582 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Foxa1P35582 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Foxa1P35582 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Foxa1P35582 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Foxa1P35582 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.54□□□□□ -0.08
Foxa1P35582 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC14.54□□□□□ -0.08
Foxa1P35582 Gm8655-201ENSMUST00000221159 852 ntBASIC14.54□□□□□ -0.08
Foxa1P35582 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Foxa1P35582 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Foxa1P35582 Prob1-201ENSMUST00000097619 3021 ntBASIC14.54□□□□□ -0.08
Foxa1P35582 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Foxa1P35582 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Foxa1P35582 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Foxa1P35582 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxa1P35582 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxa1P35582 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Foxa1P35582 App-207ENSMUST00000227737 2827 ntBASIC14.53□□□□□ -0.08
Foxa1P35582 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Foxa1P35582 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Foxa1P35582 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxa1P35582 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Foxa1P35582 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Foxa1P35582 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.53□□□□□ -0.08
Foxa1P35582 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxa1P35582 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxa1P35582 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Foxa1P35582 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Foxa1P35582 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Foxa1P35582 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Foxa1P35582 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.53□□□□□ -0.08
Foxa1P35582 Gm7153-201ENSMUST00000117092 455 ntBASIC14.53□□□□□ -0.08
Foxa1P35582 Gm8097-201ENSMUST00000117903 829 ntBASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms