Protein–RNA interactions for Protein: P10287

Cdh3, Cadherin-3, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh3P10287 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh3P10287 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh3P10287 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh3P10287 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh3P10287 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh3P10287 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh3P10287 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.61□□□□□ -0.07
Cdh3P10287 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cdh3P10287 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh3P10287 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh3P10287 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cdh3P10287 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh3P10287 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh3P10287 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.6□□□□□ -0.07
Cdh3P10287 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
Cdh3P10287 Gm11336-201ENSMUST00000118168 334 ntBASIC14.6□□□□□ -0.07
Cdh3P10287 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cdh3P10287 Gm37722-201ENSMUST00000193757 208 ntBASIC14.6□□□□□ -0.07
Cdh3P10287 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh3P10287 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.6□□□□□ -0.07
Cdh3P10287 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh3P10287 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh3P10287 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh3P10287 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.6□□□□□ -0.07
Cdh3P10287 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh3P10287 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh3P10287 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh3P10287 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh3P10287 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh3P10287 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cdh3P10287 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh3P10287 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh3P10287 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh3P10287 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh3P10287 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh3P10287 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cdh3P10287 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh3P10287 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh3P10287 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh3P10287 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
Cdh3P10287 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.59□□□□□ -0.07
Cdh3P10287 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh3P10287 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh3P10287 AA414768-201ENSMUST00000121924 1257 ntBASIC14.59□□□□□ -0.07
Cdh3P10287 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh3P10287 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh3P10287 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.59□□□□□ -0.07
Cdh3P10287 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.59□□□□□ -0.07
Cdh3P10287 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh3P10287 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh3P10287 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh3P10287 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh3P10287 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh3P10287 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Cdh3P10287 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Cdh3P10287 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh3P10287 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh3P10287 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Cdh3P10287 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdh3P10287 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cdh3P10287 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Cdh3P10287 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Cdh3P10287 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh3P10287 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh3P10287 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh3P10287 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh3P10287 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh3P10287 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh3P10287 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.58□□□□□ -0.08
Cdh3P10287 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh3P10287 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cdh3P10287 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh3P10287 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh3P10287 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh3P10287 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh3P10287 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.58□□□□□ -0.08
Cdh3P10287 Gm18115-201ENSMUST00000221209 621 ntBASIC14.58□□□□□ -0.08
Cdh3P10287 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cdh3P10287 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh3P10287 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh3P10287 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cdh3P10287 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.58□□□□□ -0.08
Cdh3P10287 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh3P10287 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh3P10287 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
Cdh3P10287 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh3P10287 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh3P10287 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh3P10287 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh3P10287 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh3P10287 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Cdh3P10287 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
Cdh3P10287 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Cdh3P10287 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Cdh3P10287 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh3P10287 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
Cdh3P10287 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh3P10287 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Cdh3P10287 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Cdh3P10287 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms