Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Abcd4O89016 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Abcd4O89016 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Abcd4O89016 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Abcd4O89016 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Abcd4O89016 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Abcd4O89016 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abcd4O89016 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abcd4O89016 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abcd4O89016 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.24□□□□□ -0.13
Abcd4O89016 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Abcd4O89016 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Abcd4O89016 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abcd4O89016 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Abcd4O89016 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abcd4O89016 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abcd4O89016 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Abcd4O89016 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abcd4O89016 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abcd4O89016 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.24□□□□□ -0.13
Abcd4O89016 AC138767.1-201ENSMUST00000222661 415 ntBASIC14.24□□□□□ -0.13
Abcd4O89016 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.24□□□□□ -0.13
Abcd4O89016 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abcd4O89016 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Abcd4O89016 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abcd4O89016 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abcd4O89016 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Abcd4O89016 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Abcd4O89016 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abcd4O89016 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abcd4O89016 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abcd4O89016 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.24□□□□□ -0.13
Abcd4O89016 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.24□□□□□ -0.13
Abcd4O89016 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Abcd4O89016 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
Abcd4O89016 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Abcd4O89016 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Abcd4O89016 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Abcd4O89016 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Abcd4O89016 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Abcd4O89016 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Abcd4O89016 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Abcd4O89016 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Abcd4O89016 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Abcd4O89016 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Abcd4O89016 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Abcd4O89016 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Abcd4O89016 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.23□□□□□ -0.13
Abcd4O89016 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Abcd4O89016 Gm18206-201ENSMUST00000207027 926 ntBASIC14.23□□□□□ -0.13
Abcd4O89016 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.23□□□□□ -0.13
Abcd4O89016 Gm6296-201ENSMUST00000222599 943 ntBASIC14.23□□□□□ -0.13
Abcd4O89016 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Abcd4O89016 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Abcd4O89016 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Abcd4O89016 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Abcd4O89016 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Abcd4O89016 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Abcd4O89016 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Abcd4O89016 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Abcd4O89016 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd4O89016 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd4O89016 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd4O89016 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd4O89016 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd4O89016 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd4O89016 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd4O89016 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.22□□□□□ -0.13
Abcd4O89016 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd4O89016 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Abcd4O89016 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Abcd4O89016 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd4O89016 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.22□□□□□ -0.13
Abcd4O89016 Gm12497-201ENSMUST00000138778 237 ntBASIC14.22□□□□□ -0.13
Abcd4O89016 Mir5131-201ENSMUST00000175426 93 ntBASIC14.22□□□□□ -0.13
Abcd4O89016 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd4O89016 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd4O89016 Gm36967-201ENSMUST00000193814 266 ntBASIC14.22□□□□□ -0.13
Abcd4O89016 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Abcd4O89016 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.22□□□□□ -0.13
Abcd4O89016 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd4O89016 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd4O89016 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd4O89016 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd4O89016 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd4O89016 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.22□□□□□ -0.13
Abcd4O89016 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.22□□□□□ -0.13
Abcd4O89016 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd4O89016 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd4O89016 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd4O89016 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd4O89016 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Abcd4O89016 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Abcd4O89016 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abcd4O89016 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.21□□□□□ -0.13
Abcd4O89016 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
Abcd4O89016 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abcd4O89016 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Abcd4O89016 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Abcd4O89016 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms