Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Gm44872-201ENSMUST00000207864 420 ntBASIC14.93□□□□□ -0.02
Tgfbr3O88393 Gm45747-201ENSMUST00000212203 999 ntBASIC14.93□□□□□ -0.02
Tgfbr3O88393 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tgfbr3O88393 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Tgfbr3O88393 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tgfbr3O88393 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tgfbr3O88393 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tgfbr3O88393 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Tgfbr3O88393 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tgfbr3O88393 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tgfbr3O88393 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tgfbr3O88393 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.93□□□□□ -0.02
Tgfbr3O88393 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Tgfbr3O88393 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tgfbr3O88393 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Tgfbr3O88393 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.93□□□□□ -0.02
Tgfbr3O88393 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tgfbr3O88393 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tgfbr3O88393 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Tgfbr3O88393 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tgfbr3O88393 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Tgfbr3O88393 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Tgfbr3O88393 Gm14057-201ENSMUST00000120631 482 ntBASIC14.92□□□□□ -0.02
Tgfbr3O88393 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.92□□□□□ -0.02
Tgfbr3O88393 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.92□□□□□ -0.02
Tgfbr3O88393 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.92□□□□□ -0.02
Tgfbr3O88393 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.92□□□□□ -0.02
Tgfbr3O88393 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.92□□□□□ -0.02
Tgfbr3O88393 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tgfbr3O88393 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Tgfbr3O88393 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tgfbr3O88393 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tgfbr3O88393 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tgfbr3O88393 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tgfbr3O88393 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tgfbr3O88393 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tgfbr3O88393 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tgfbr3O88393 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Tgfbr3O88393 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tgfbr3O88393 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tgfbr3O88393 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.92□□□□□ -0.02
Tgfbr3O88393 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tgfbr3O88393 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tgfbr3O88393 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Tgfbr3O88393 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tgfbr3O88393 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tgfbr3O88393 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Tgfbr3O88393 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.91□□□□□ -0.02
Tgfbr3O88393 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tgfbr3O88393 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Tgfbr3O88393 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.91□□□□□ -0.02
Tgfbr3O88393 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tgfbr3O88393 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.91□□□□□ -0.02
Tgfbr3O88393 Gm5177-201ENSMUST00000183092 997 ntBASIC14.91□□□□□ -0.02
Tgfbr3O88393 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Tgfbr3O88393 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.91□□□□□ -0.02
Tgfbr3O88393 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.91□□□□□ -0.02
Tgfbr3O88393 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.91□□□□□ -0.02
Tgfbr3O88393 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tgfbr3O88393 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
Tgfbr3O88393 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tgfbr3O88393 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14.91□□□□□ -0.02
Tgfbr3O88393 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tgfbr3O88393 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tgfbr3O88393 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Tgfbr3O88393 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Tgfbr3O88393 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Tgfbr3O88393 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tgfbr3O88393 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Tgfbr3O88393 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tgfbr3O88393 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tgfbr3O88393 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tgfbr3O88393 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tgfbr3O88393 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tgfbr3O88393 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tgfbr3O88393 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tgfbr3O88393 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Tgfbr3O88393 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.9□□□□□ -0.02
Tgfbr3O88393 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.9□□□□□ -0.02
Tgfbr3O88393 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tgfbr3O88393 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Tgfbr3O88393 Mir6956-201ENSMUST00000183598 62 ntBASIC14.9□□□□□ -0.02
Tgfbr3O88393 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Tgfbr3O88393 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
Tgfbr3O88393 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.9□□□□□ -0.02
Tgfbr3O88393 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tgfbr3O88393 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tgfbr3O88393 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tgfbr3O88393 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Tgfbr3O88393 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tgfbr3O88393 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tgfbr3O88393 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tgfbr3O88393 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tgfbr3O88393 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tgfbr3O88393 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tgfbr3O88393 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tgfbr3O88393 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Tgfbr3O88393 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tgfbr3O88393 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Tgfbr3O88393 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms