Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm13168-201ENSMUST00000121771 632 ntBASIC14.4□□□□□ -0.1
Shisa8J3QNX5 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.4□□□□□ -0.1
Shisa8J3QNX5 Gm27463-201ENSMUST00000183569 57 ntBASIC14.4□□□□□ -0.1
Shisa8J3QNX5 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Shisa8J3QNX5 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa8J3QNX5 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa8J3QNX5 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa8J3QNX5 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.4□□□□□ -0.1
Shisa8J3QNX5 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.4□□□□□ -0.1
Shisa8J3QNX5 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa8J3QNX5 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa8J3QNX5 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa8J3QNX5 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa8J3QNX5 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Shisa8J3QNX5 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Shisa8J3QNX5 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shisa8J3QNX5 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shisa8J3QNX5 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.39□□□□□ -0.11
Shisa8J3QNX5 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shisa8J3QNX5 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.39□□□□□ -0.11
Shisa8J3QNX5 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shisa8J3QNX5 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shisa8J3QNX5 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shisa8J3QNX5 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shisa8J3QNX5 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Shisa8J3QNX5 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.39□□□□□ -0.11
Shisa8J3QNX5 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.39□□□□□ -0.11
Shisa8J3QNX5 Gm29707-201ENSMUST00000196325 491 ntBASIC14.39□□□□□ -0.11
Shisa8J3QNX5 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shisa8J3QNX5 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shisa8J3QNX5 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shisa8J3QNX5 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shisa8J3QNX5 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shisa8J3QNX5 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shisa8J3QNX5 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Shisa8J3QNX5 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shisa8J3QNX5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Shisa8J3QNX5 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shisa8J3QNX5 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Shisa8J3QNX5 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.39□□□□□ -0.11
Shisa8J3QNX5 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Shisa8J3QNX5 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shisa8J3QNX5 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shisa8J3QNX5 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.38□□□□□ -0.11
Shisa8J3QNX5 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shisa8J3QNX5 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shisa8J3QNX5 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Shisa8J3QNX5 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.38□□□□□ -0.11
Shisa8J3QNX5 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shisa8J3QNX5 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shisa8J3QNX5 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shisa8J3QNX5 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shisa8J3QNX5 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC14.38□□□□□ -0.11
Shisa8J3QNX5 Gm21814-202ENSMUST00000203277 873 ntBASIC14.38□□□□□ -0.11
Shisa8J3QNX5 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shisa8J3QNX5 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Shisa8J3QNX5 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.38□□□□□ -0.11
Shisa8J3QNX5 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Shisa8J3QNX5 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shisa8J3QNX5 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shisa8J3QNX5 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shisa8J3QNX5 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shisa8J3QNX5 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shisa8J3QNX5 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shisa8J3QNX5 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Shisa8J3QNX5 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Shisa8J3QNX5 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.37□□□□□ -0.11
Shisa8J3QNX5 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shisa8J3QNX5 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shisa8J3QNX5 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
Shisa8J3QNX5 Gm27011-201ENSMUST00000182352 972 ntBASIC14.37□□□□□ -0.11
Shisa8J3QNX5 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shisa8J3QNX5 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shisa8J3QNX5 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Shisa8J3QNX5 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Shisa8J3QNX5 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Shisa8J3QNX5 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Shisa8J3QNX5 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Shisa8J3QNX5 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shisa8J3QNX5 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Shisa8J3QNX5 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Shisa8J3QNX5 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.37□□□□□ -0.11
Shisa8J3QNX5 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Shisa8J3QNX5 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Shisa8J3QNX5 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.37□□□□□ -0.11
Shisa8J3QNX5 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.37□□□□□ -0.11
Shisa8J3QNX5 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shisa8J3QNX5 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shisa8J3QNX5 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Shisa8J3QNX5 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Shisa8J3QNX5 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms