Protein–RNA interactions for Protein: E0CZH3

Foxi3, Forkhead box I3, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxi3E0CZH3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxi3E0CZH3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxi3E0CZH3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Foxi3E0CZH3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxi3E0CZH3 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxi3E0CZH3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxi3E0CZH3 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.13□□□□□ -0.47
Foxi3E0CZH3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxi3E0CZH3 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Foxi3E0CZH3 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Foxi3E0CZH3 Nrn1-203ENSMUST00000223611 1443 ntBASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Gm27275-201ENSMUST00000184318 272 ntBASIC12.11□□□□□ -0.47
Foxi3E0CZH3 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.11□□□□□ -0.47
Foxi3E0CZH3 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Foxi3E0CZH3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxi3E0CZH3 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Foxi3E0CZH3 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Foxi3E0CZH3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxi3E0CZH3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxi3E0CZH3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxi3E0CZH3 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.1□□□□□ -0.47
Foxi3E0CZH3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxi3E0CZH3 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Foxi3E0CZH3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxi3E0CZH3 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxi3E0CZH3 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.1□□□□□ -0.47
Foxi3E0CZH3 Gm43183-201ENSMUST00000200632 547 ntBASIC12.1□□□□□ -0.47
Foxi3E0CZH3 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxi3E0CZH3 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Foxi3E0CZH3 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
Foxi3E0CZH3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.1□□□□□ -0.47
Foxi3E0CZH3 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.1□□□□□ -0.47
Foxi3E0CZH3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxi3E0CZH3 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxi3E0CZH3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Foxi3E0CZH3 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms