Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC18.07■□□□□ 0.48
Syce3B5KM66 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syce3B5KM66 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syce3B5KM66 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syce3B5KM66 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.07■□□□□ 0.48
Syce3B5KM66 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.07■□□□□ 0.48
Syce3B5KM66 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syce3B5KM66 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.07■□□□□ 0.48
Syce3B5KM66 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Syce3B5KM66 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Syce3B5KM66 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC18.07■□□□□ 0.48
Syce3B5KM66 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syce3B5KM66 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syce3B5KM66 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Syce3B5KM66 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Syce3B5KM66 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Syce3B5KM66 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Syce3B5KM66 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Syce3B5KM66 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.06■□□□□ 0.48
Syce3B5KM66 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syce3B5KM66 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syce3B5KM66 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syce3B5KM66 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Syce3B5KM66 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Syce3B5KM66 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syce3B5KM66 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.06■□□□□ 0.48
Syce3B5KM66 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.06■□□□□ 0.48
Syce3B5KM66 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.06■□□□□ 0.48
Syce3B5KM66 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syce3B5KM66 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syce3B5KM66 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syce3B5KM66 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syce3B5KM66 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syce3B5KM66 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syce3B5KM66 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syce3B5KM66 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syce3B5KM66 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
Syce3B5KM66 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Syce3B5KM66 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Syce3B5KM66 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Syce3B5KM66 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.05■□□□□ 0.48
Syce3B5KM66 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Syce3B5KM66 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syce3B5KM66 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syce3B5KM66 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syce3B5KM66 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Syce3B5KM66 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syce3B5KM66 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syce3B5KM66 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syce3B5KM66 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Syce3B5KM66 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Syce3B5KM66 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Syce3B5KM66 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Syce3B5KM66 Gm3375-201ENSMUST00000203929 796 ntBASIC18.05■□□□□ 0.48
Syce3B5KM66 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syce3B5KM66 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syce3B5KM66 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syce3B5KM66 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Syce3B5KM66 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syce3B5KM66 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Syce3B5KM66 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Syce3B5KM66 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syce3B5KM66 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syce3B5KM66 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syce3B5KM66 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syce3B5KM66 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syce3B5KM66 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syce3B5KM66 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syce3B5KM66 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syce3B5KM66 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Syce3B5KM66 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Syce3B5KM66 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syce3B5KM66 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syce3B5KM66 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syce3B5KM66 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Syce3B5KM66 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Syce3B5KM66 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
Syce3B5KM66 Gm29707-201ENSMUST00000196325 491 ntBASIC18.04■□□□□ 0.48
Syce3B5KM66 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.04■□□□□ 0.48
Syce3B5KM66 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syce3B5KM66 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syce3B5KM66 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Syce3B5KM66 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syce3B5KM66 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syce3B5KM66 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syce3B5KM66 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Syce3B5KM66 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Syce3B5KM66 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Syce3B5KM66 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Syce3B5KM66 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Syce3B5KM66 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Syce3B5KM66 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Syce3B5KM66 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Syce3B5KM66 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC18.03■□□□□ 0.48
Syce3B5KM66 Gm11336-201ENSMUST00000118168 334 ntBASIC18.03■□□□□ 0.48
Syce3B5KM66 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Syce3B5KM66 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC18.03■□□□□ 0.48
Syce3B5KM66 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Syce3B5KM66 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.03■□□□□ 0.48
Syce3B5KM66 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms