Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3n-3A0A0G2JEM0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Trmt13-210ENSMUST00000198454 880 ntBASIC11.96□□□□□ -0.49
Trav3n-3A0A0G2JEM0 AC164629.5-201ENSMUST00000220387 632 ntBASIC11.96□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Il3ra-202ENSMUST00000223589 738 ntBASIC11.96□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav3n-3A0A0G2JEM0 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Gm37728-201ENSMUST00000195025 2292 ntBASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trav3n-3A0A0G2JEM0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms