Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Gm43859-201ENSMUST00000200075 1412 ntBASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Gm18421-201ENSMUST00000204122 625 ntBASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 AC124581.1-201ENSMUST00000225416 1399 ntBASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Gm8784-201ENSMUST00000222096 1435 ntBASIC12.29□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-3A0A0B4J1H2 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Camk2g-217ENSMUST00000226630 1937 ntBASIC12.29□□□□□ -0.44
Trbv13-3A0A0B4J1H2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC12.29□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.28□□□□□ -0.44
Trbv13-3A0A0B4J1H2 Gm43183-201ENSMUST00000200632 547 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms