Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-47A0A0A6YY41 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.03□□□□□ -0.32
Ighv1-47A0A0A6YY41 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-47A0A0A6YY41 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-47A0A0A6YY41 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-47A0A0A6YY41 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-47A0A0A6YY41 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Ighv1-47A0A0A6YY41 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ighv1-47A0A0A6YY41 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Ighv1-47A0A0A6YY41 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ighv1-47A0A0A6YY41 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ighv1-47A0A0A6YY41 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.02□□□□□ -0.32
Ighv1-47A0A0A6YY41 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Ighv1-47A0A0A6YY41 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Ighv1-47A0A0A6YY41 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Ighv1-47A0A0A6YY41 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.02□□□□□ -0.32
Ighv1-47A0A0A6YY41 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ighv1-47A0A0A6YY41 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-47A0A0A6YY41 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-47A0A0A6YY41 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.02□□□□□ -0.33
Ighv1-47A0A0A6YY41 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ighv1-47A0A0A6YY41 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.02□□□□□ -0.33
Ighv1-47A0A0A6YY41 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-47A0A0A6YY41 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-47A0A0A6YY41 Gm45328-201ENSMUST00000210942 917 ntBASIC13.02□□□□□ -0.33
Ighv1-47A0A0A6YY41 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-47A0A0A6YY41 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-47A0A0A6YY41 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-47A0A0A6YY41 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-47A0A0A6YY41 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-47A0A0A6YY41 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.02□□□□□ -0.33
Ighv1-47A0A0A6YY41 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.02□□□□□ -0.33
Ighv1-47A0A0A6YY41 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-47A0A0A6YY41 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-47A0A0A6YY41 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ighv1-47A0A0A6YY41 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-47A0A0A6YY41 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ighv1-47A0A0A6YY41 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ighv1-47A0A0A6YY41 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC13.01□□□□□ -0.33
Ighv1-47A0A0A6YY41 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Tfap2a-203ENSMUST00000223869 2037 ntBASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Gm6345-202ENSMUST00000180900 204 ntBASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 AC125350.1-201ENSMUST00000225115 903 ntBASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 AC158538.1-201ENSMUST00000225870 294 ntBASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Ighv1-47A0A0A6YY41 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms