Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Flg-201ENSMUST00000050758 1488 ntBASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Nespas-201ENSMUST00000143738 1083 ntBASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Gm6420-201ENSMUST00000193885 723 ntBASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 AC174678.1-201ENSMUST00000228007 2749 ntBASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav3-4A0A075B654 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Gm42778-201ENSMUST00000199644 553 ntBASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Trav3-4A0A075B654 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Gm38391-201ENSMUST00000191720 4069 ntBASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Gm27528-202ENSMUST00000222916 2012 ntBASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Trav3-4A0A075B654 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms