Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Trav8-1A0A075B641 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 AC163637.1-201ENSMUST00000215491 1894 ntBASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Mtag2-201ENSMUST00000058665 714 ntBASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav8-1A0A075B641 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trav8-1A0A075B641 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Mir6349-201ENSMUST00000184059 97 ntBASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav8-1A0A075B641 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 AC148324.1-201ENSMUST00000219034 4240 ntBASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav8-1A0A075B641 Rab3c-203ENSMUST00000224180 967 ntBASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms