Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Col13a1Q9R1N9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Col13a1Q9R1N9 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
Col13a1Q9R1N9 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Col13a1Q9R1N9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 AA543401-201ENSMUST00000164248 1269 ntBASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Gm5745-201ENSMUST00000183748 313 ntBASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Gm20949-201ENSMUST00000206478 952 ntBASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Gm8655-201ENSMUST00000221159 852 ntBASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.39□□□□□ -0.27
Col13a1Q9R1N9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Hivep3-201ENSMUST00000084306 2973 ntBASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Gm17271-201ENSMUST00000165535 355 ntBASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Col13a1Q9R1N9 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms