Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacna1fQ9JIS7 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cacna1fQ9JIS7 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacna1fQ9JIS7 Gm15693-201ENSMUST00000120470 637 ntBASIC17.8■□□□□ 0.44
Cacna1fQ9JIS7 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Cacna1fQ9JIS7 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.8■□□□□ 0.44
Cacna1fQ9JIS7 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacna1fQ9JIS7 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cacna1fQ9JIS7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacna1fQ9JIS7 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Cacna1fQ9JIS7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Cacna1fQ9JIS7 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 Gm20949-201ENSMUST00000206478 952 ntBASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Cacna1fQ9JIS7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1fQ9JIS7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.78■□□□□ 0.44
Cacna1fQ9JIS7 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1fQ9JIS7 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1fQ9JIS7 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1fQ9JIS7 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1fQ9JIS7 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1fQ9JIS7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Cacna1fQ9JIS7 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1fQ9JIS7 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1fQ9JIS7 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1fQ9JIS7 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1fQ9JIS7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1fQ9JIS7 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.78■□□□□ 0.44
Cacna1fQ9JIS7 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.78■□□□□ 0.44
Cacna1fQ9JIS7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1fQ9JIS7 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.78■□□□□ 0.44
Cacna1fQ9JIS7 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1fQ9JIS7 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1fQ9JIS7 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Cacna1fQ9JIS7 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Cacna1fQ9JIS7 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.77■□□□□ 0.44
Cacna1fQ9JIS7 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.77■□□□□ 0.44
Cacna1fQ9JIS7 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.77■□□□□ 0.44
Cacna1fQ9JIS7 AC124732.2-201ENSMUST00000221977 316 ntBASIC17.77■□□□□ 0.44
Cacna1fQ9JIS7 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cacna1fQ9JIS7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Cacna1fQ9JIS7 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Cacna1fQ9JIS7 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC17.77■□□□□ 0.43
Cacna1fQ9JIS7 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.43
Cacna1fQ9JIS7 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.77■□□□□ 0.43
Cacna1fQ9JIS7 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.77■□□□□ 0.43
Cacna1fQ9JIS7 Gm6973-201ENSMUST00000117080 721 ntBASIC17.77■□□□□ 0.43
Cacna1fQ9JIS7 Gm29541-201ENSMUST00000191351 678 ntBASIC17.77■□□□□ 0.43
Cacna1fQ9JIS7 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.77■□□□□ 0.43
Cacna1fQ9JIS7 AC126408.1-201ENSMUST00000225184 523 ntBASIC17.77■□□□□ 0.43
Cacna1fQ9JIS7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cacna1fQ9JIS7 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Cacna1fQ9JIS7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1fQ9JIS7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.76■□□□□ 0.43
Cacna1fQ9JIS7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1fQ9JIS7 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1fQ9JIS7 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC17.76■□□□□ 0.43
Cacna1fQ9JIS7 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1fQ9JIS7 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1fQ9JIS7 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1fQ9JIS7 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1fQ9JIS7 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1fQ9JIS7 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1fQ9JIS7 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Cacna1fQ9JIS7 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1fQ9JIS7 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1fQ9JIS7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Cacna1fQ9JIS7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1fQ9JIS7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1fQ9JIS7 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Cacna1fQ9JIS7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1fQ9JIS7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1fQ9JIS7 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1fQ9JIS7 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1fQ9JIS7 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Cacna1fQ9JIS7 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms