Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-4Q9EQM3 Gm18057-201ENSMUST00000208220 503 ntBASIC16.15■□□□□ 0.18
Nkx2-4Q9EQM3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.15■□□□□ 0.18
Nkx2-4Q9EQM3 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-4Q9EQM3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.15■□□□□ 0.18
Nkx2-4Q9EQM3 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-4Q9EQM3 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-4Q9EQM3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nkx2-4Q9EQM3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-4Q9EQM3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Nkx2-4Q9EQM3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-4Q9EQM3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Nkx2-4Q9EQM3 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Nkx2-4Q9EQM3 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Gm2423-201ENSMUST00000074863 733 ntBASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Nkx2-4Q9EQM3 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.13■□□□□ 0.17
Nkx2-4Q9EQM3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.13■□□□□ 0.17
Nkx2-4Q9EQM3 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-4Q9EQM3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-4Q9EQM3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-4Q9EQM3 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-4Q9EQM3 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-4Q9EQM3 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.13■□□□□ 0.17
Nkx2-4Q9EQM3 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-4Q9EQM3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.13■□□□□ 0.17
Nkx2-4Q9EQM3 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.13■□□□□ 0.17
Nkx2-4Q9EQM3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-4Q9EQM3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Nkx2-4Q9EQM3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Nkx2-4Q9EQM3 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.12■□□□□ 0.17
Nkx2-4Q9EQM3 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-4Q9EQM3 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-4Q9EQM3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.12■□□□□ 0.17
Nkx2-4Q9EQM3 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-4Q9EQM3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-4Q9EQM3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-4Q9EQM3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-4Q9EQM3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-4Q9EQM3 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.12■□□□□ 0.17
Nkx2-4Q9EQM3 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.12■□□□□ 0.17
Nkx2-4Q9EQM3 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Nkx2-4Q9EQM3 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.12■□□□□ 0.17
Nkx2-4Q9EQM3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Nkx2-4Q9EQM3 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Nkx2-4Q9EQM3 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Nkx2-4Q9EQM3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Nkx2-4Q9EQM3 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
Nkx2-4Q9EQM3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 Gm13223-201ENSMUST00000118609 747 ntBASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 Gm16198-201ENSMUST00000118766 670 ntBASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Nkx2-4Q9EQM3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms