Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 Rprl3-201ENSMUST00000157400 290 ntBASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 Gm25406-201ENSMUST00000157599 105 ntBASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Lrrc40Q9CRC8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Lrrc40Q9CRC8 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lrrc40Q9CRC8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lrrc40Q9CRC8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.67■□□□□ 0.1
Lrrc40Q9CRC8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lrrc40Q9CRC8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Lrrc40Q9CRC8 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lrrc40Q9CRC8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.67■□□□□ 0.1
Lrrc40Q9CRC8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Lrrc40Q9CRC8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lrrc40Q9CRC8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lrrc40Q9CRC8 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lrrc40Q9CRC8 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lrrc40Q9CRC8 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.67■□□□□ 0.1
Lrrc40Q9CRC8 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lrrc40Q9CRC8 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lrrc40Q9CRC8 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lrrc40Q9CRC8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lrrc40Q9CRC8 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Lrrc40Q9CRC8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lrrc40Q9CRC8 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.67■□□□□ 0.1
Lrrc40Q9CRC8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lrrc40Q9CRC8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lrrc40Q9CRC8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lrrc40Q9CRC8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Lrrc40Q9CRC8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Lrrc40Q9CRC8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lrrc40Q9CRC8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lrrc40Q9CRC8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lrrc40Q9CRC8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lrrc40Q9CRC8 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lrrc40Q9CRC8 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lrrc40Q9CRC8 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Lrrc40Q9CRC8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lrrc40Q9CRC8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
Lrrc40Q9CRC8 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.66■□□□□ 0.1
Lrrc40Q9CRC8 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.66■□□□□ 0.1
Lrrc40Q9CRC8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.66■□□□□ 0.1
Lrrc40Q9CRC8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lrrc40Q9CRC8 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Lrrc40Q9CRC8 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lrrc40Q9CRC8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lrrc40Q9CRC8 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lrrc40Q9CRC8 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lrrc40Q9CRC8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lrrc40Q9CRC8 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lrrc40Q9CRC8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Lrrc40Q9CRC8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lrrc40Q9CRC8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lrrc40Q9CRC8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.66■□□□□ 0.1
Lrrc40Q9CRC8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lrrc40Q9CRC8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.65■□□□□ 0.1
Lrrc40Q9CRC8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lrrc40Q9CRC8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lrrc40Q9CRC8 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms