Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 Gm43173-201ENSMUST00000202246 593 ntBASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chchd1Q9CQA6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Chchd1Q9CQA6 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chchd1Q9CQA6 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Chchd1Q9CQA6 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chchd1Q9CQA6 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Chchd1Q9CQA6 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.96□□□□□ -0.49
Chchd1Q9CQA6 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chchd1Q9CQA6 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chchd1Q9CQA6 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chchd1Q9CQA6 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chchd1Q9CQA6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chchd1Q9CQA6 Gm40848-201ENSMUST00000221998 324 ntBASIC11.96□□□□□ -0.49
Chchd1Q9CQA6 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC11.96□□□□□ -0.49
Chchd1Q9CQA6 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chchd1Q9CQA6 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chchd1Q9CQA6 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Chchd1Q9CQA6 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Chchd1Q9CQA6 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Chchd1Q9CQA6 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chchd1Q9CQA6 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chchd1Q9CQA6 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chchd1Q9CQA6 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chchd1Q9CQA6 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chchd1Q9CQA6 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chchd1Q9CQA6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Chchd1Q9CQA6 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.96□□□□□ -0.5
Chchd1Q9CQA6 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chchd1Q9CQA6 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chchd1Q9CQA6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chchd1Q9CQA6 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Chchd1Q9CQA6 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Chchd1Q9CQA6 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Chchd1Q9CQA6 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Gm38327-201ENSMUST00000195852 1755 ntBASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Gm2399-201ENSMUST00000104944 225 ntBASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Chchd1Q9CQA6 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chchd1Q9CQA6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chchd1Q9CQA6 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chchd1Q9CQA6 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chchd1Q9CQA6 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Chchd1Q9CQA6 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chchd1Q9CQA6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Chchd1Q9CQA6 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chchd1Q9CQA6 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Chchd1Q9CQA6 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Chchd1Q9CQA6 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms