Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhb4Q91XZ6 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb4Q91XZ6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb4Q91XZ6 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb4Q91XZ6 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Pcdhb4Q91XZ6 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb4Q91XZ6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb4Q91XZ6 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb4Q91XZ6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb4Q91XZ6 Gm9013-201ENSMUST00000132939 882 ntBASIC15.71■□□□□ 0.11
Pcdhb4Q91XZ6 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb4Q91XZ6 Gm10052-201ENSMUST00000168019 960 ntBASIC15.71■□□□□ 0.11
Pcdhb4Q91XZ6 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Pcdhb4Q91XZ6 Gm7729-201ENSMUST00000050143 801 ntBASIC15.71■□□□□ 0.11
Pcdhb4Q91XZ6 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.71■□□□□ 0.11
Pcdhb4Q91XZ6 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb4Q91XZ6 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdhb4Q91XZ6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdhb4Q91XZ6 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Pcdhb4Q91XZ6 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.71■□□□□ 0.1
Pcdhb4Q91XZ6 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Gm44430-201ENSMUST00000203376 995 ntBASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdhb4Q91XZ6 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.69■□□□□ 0.1
Pcdhb4Q91XZ6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb4Q91XZ6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb4Q91XZ6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb4Q91XZ6 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhb4Q91XZ6 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb4Q91XZ6 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.68■□□□□ 0.1
Pcdhb4Q91XZ6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb4Q91XZ6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhb4Q91XZ6 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Pcdhb4Q91XZ6 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms