Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ndc1Q8VCB1 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ndc1Q8VCB1 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ndc1Q8VCB1 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ndc1Q8VCB1 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ndc1Q8VCB1 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ndc1Q8VCB1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ndc1Q8VCB1 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ndc1Q8VCB1 Gm9172-201ENSMUST00000212092 954 ntBASIC14.88□□□□□ -0.03
Ndc1Q8VCB1 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ndc1Q8VCB1 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ndc1Q8VCB1 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ndc1Q8VCB1 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ndc1Q8VCB1 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ndc1Q8VCB1 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ndc1Q8VCB1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ndc1Q8VCB1 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.88□□□□□ -0.03
Ndc1Q8VCB1 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ndc1Q8VCB1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ndc1Q8VCB1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Gm25990-201ENSMUST00000102440 86 ntBASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC14.87□□□□□ -0.03
Ndc1Q8VCB1 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 Gm15173-201ENSMUST00000122049 433 ntBASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ndc1Q8VCB1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ndc1Q8VCB1 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Ndc1Q8VCB1 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.85□□□□□ -0.03
Ndc1Q8VCB1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ndc1Q8VCB1 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ndc1Q8VCB1 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Ndc1Q8VCB1 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ndc1Q8VCB1 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ndc1Q8VCB1 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ndc1Q8VCB1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.85□□□□□ -0.03
Ndc1Q8VCB1 Mir6404-201ENSMUST00000183699 94 ntBASIC14.85□□□□□ -0.03
Ndc1Q8VCB1 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.85□□□□□ -0.03
Ndc1Q8VCB1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.85□□□□□ -0.03
Ndc1Q8VCB1 Gm8655-201ENSMUST00000221159 852 ntBASIC14.85□□□□□ -0.03
Ndc1Q8VCB1 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ndc1Q8VCB1 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ndc1Q8VCB1 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ndc1Q8VCB1 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.85□□□□□ -0.03
Ndc1Q8VCB1 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms