Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rsph6aQ8CDR2 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rsph6aQ8CDR2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rsph6aQ8CDR2 Shroom3-211ENSMUST00000225438 5742 ntBASIC20.52■□□□□ 0.87
Rsph6aQ8CDR2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rsph6aQ8CDR2 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rsph6aQ8CDR2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rsph6aQ8CDR2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rsph6aQ8CDR2 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rsph6aQ8CDR2 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rsph6aQ8CDR2 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Rsph6aQ8CDR2 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rsph6aQ8CDR2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC20.51■□□□□ 0.87
Rsph6aQ8CDR2 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rsph6aQ8CDR2 AC174742.1-201ENSMUST00000218272 304 ntBASIC20.51■□□□□ 0.87
Rsph6aQ8CDR2 AC225888.1-201ENSMUST00000227184 728 ntBASIC20.51■□□□□ 0.87
Rsph6aQ8CDR2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Rsph6aQ8CDR2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rsph6aQ8CDR2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rsph6aQ8CDR2 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC20.51■□□□□ 0.87
Rsph6aQ8CDR2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rsph6aQ8CDR2 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rsph6aQ8CDR2 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rsph6aQ8CDR2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rsph6aQ8CDR2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC20.51■□□□□ 0.87
Rsph6aQ8CDR2 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rsph6aQ8CDR2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rsph6aQ8CDR2 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Rsph6aQ8CDR2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Rsph6aQ8CDR2 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Rsph6aQ8CDR2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rsph6aQ8CDR2 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rsph6aQ8CDR2 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rsph6aQ8CDR2 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rsph6aQ8CDR2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC20.5■□□□□ 0.87
Rsph6aQ8CDR2 H2af-ps-201ENSMUST00000119066 295 ntBASIC20.5■□□□□ 0.87
Rsph6aQ8CDR2 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC20.5■□□□□ 0.87
Rsph6aQ8CDR2 Mir8117-201ENSMUST00000184773 107 ntBASIC20.5■□□□□ 0.87
Rsph6aQ8CDR2 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC20.5■□□□□ 0.87
Rsph6aQ8CDR2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC20.5■□□□□ 0.87
Rsph6aQ8CDR2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC20.5■□□□□ 0.87
Rsph6aQ8CDR2 AC159295.1-201ENSMUST00000225326 940 ntBASIC20.5■□□□□ 0.87
Rsph6aQ8CDR2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rsph6aQ8CDR2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Rsph6aQ8CDR2 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rsph6aQ8CDR2 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Rsph6aQ8CDR2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Rsph6aQ8CDR2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rsph6aQ8CDR2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rsph6aQ8CDR2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rsph6aQ8CDR2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rsph6aQ8CDR2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Rsph6aQ8CDR2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rsph6aQ8CDR2 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rsph6aQ8CDR2 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rsph6aQ8CDR2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rsph6aQ8CDR2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rsph6aQ8CDR2 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rsph6aQ8CDR2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rsph6aQ8CDR2 Gm23935-201ENSMUST00000102303 57 ntBASIC20.49■□□□□ 0.87
Rsph6aQ8CDR2 Gm24270-201ENSMUST00000102326 57 ntBASIC20.49■□□□□ 0.87
Rsph6aQ8CDR2 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rsph6aQ8CDR2 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rsph6aQ8CDR2 Gm24245-201ENSMUST00000157318 57 ntBASIC20.49■□□□□ 0.87
Rsph6aQ8CDR2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC20.49■□□□□ 0.87
Rsph6aQ8CDR2 Gm43575-201ENSMUST00000196420 516 ntBASIC20.49■□□□□ 0.87
Rsph6aQ8CDR2 Gm7787-201ENSMUST00000216858 688 ntBASIC20.49■□□□□ 0.87
Rsph6aQ8CDR2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rsph6aQ8CDR2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rsph6aQ8CDR2 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rsph6aQ8CDR2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rsph6aQ8CDR2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rsph6aQ8CDR2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Gm7669-201ENSMUST00000210184 1603 ntBASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rsph6aQ8CDR2 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms