Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp20Q8C6M1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp20Q8C6M1 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp20Q8C6M1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Usp20Q8C6M1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
Usp20Q8C6M1 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp20Q8C6M1 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.43■□□□□ 0.38
Usp20Q8C6M1 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp20Q8C6M1 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp20Q8C6M1 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp20Q8C6M1 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp20Q8C6M1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Usp20Q8C6M1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.43■□□□□ 0.38
Usp20Q8C6M1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17.43■□□□□ 0.38
Usp20Q8C6M1 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp20Q8C6M1 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp20Q8C6M1 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp20Q8C6M1 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp20Q8C6M1 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.43■□□□□ 0.38
Usp20Q8C6M1 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp20Q8C6M1 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.43■□□□□ 0.38
Usp20Q8C6M1 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp20Q8C6M1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp20Q8C6M1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp20Q8C6M1 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Usp20Q8C6M1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp20Q8C6M1 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Usp20Q8C6M1 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp20Q8C6M1 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp20Q8C6M1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp20Q8C6M1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp20Q8C6M1 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp20Q8C6M1 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp20Q8C6M1 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp20Q8C6M1 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Usp20Q8C6M1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp20Q8C6M1 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Usp20Q8C6M1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC17.42■□□□□ 0.38
Usp20Q8C6M1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.42■□□□□ 0.38
Usp20Q8C6M1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC17.42■□□□□ 0.38
Usp20Q8C6M1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp20Q8C6M1 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp20Q8C6M1 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Usp20Q8C6M1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp20Q8C6M1 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Usp20Q8C6M1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp20Q8C6M1 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Usp20Q8C6M1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Usp20Q8C6M1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp20Q8C6M1 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp20Q8C6M1 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp20Q8C6M1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Usp20Q8C6M1 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Usp20Q8C6M1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Usp20Q8C6M1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp20Q8C6M1 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp20Q8C6M1 Gm14822-201ENSMUST00000122247 291 ntBASIC17.4■□□□□ 0.38
Usp20Q8C6M1 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC17.4■□□□□ 0.38
Usp20Q8C6M1 Gm6736-201ENSMUST00000166583 948 ntBASIC17.4■□□□□ 0.38
Usp20Q8C6M1 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp20Q8C6M1 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.4■□□□□ 0.38
Usp20Q8C6M1 AC084391.1-201ENSMUST00000200651 141 ntBASIC17.4■□□□□ 0.38
Usp20Q8C6M1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp20Q8C6M1 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp20Q8C6M1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp20Q8C6M1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp20Q8C6M1 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp20Q8C6M1 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.4■□□□□ 0.38
Usp20Q8C6M1 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Usp20Q8C6M1 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Usp20Q8C6M1 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp20Q8C6M1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Usp20Q8C6M1 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms