Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cps1Q8C196 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Cps1Q8C196 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC21.08■□□□□ 0.96
Cps1Q8C196 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC21.08■□□□□ 0.96
Cps1Q8C196 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC21.08■□□□□ 0.96
Cps1Q8C196 Gm5866-201ENSMUST00000177881 973 ntBASIC21.08■□□□□ 0.96
Cps1Q8C196 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cps1Q8C196 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cps1Q8C196 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC21.08■□□□□ 0.96
Cps1Q8C196 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cps1Q8C196 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cps1Q8C196 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cps1Q8C196 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Cps1Q8C196 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Cps1Q8C196 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cps1Q8C196 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cps1Q8C196 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cps1Q8C196 Gm6415-201ENSMUST00000118488 348 ntBASIC21.07■□□□□ 0.96
Cps1Q8C196 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cps1Q8C196 Gm18737-201ENSMUST00000173594 937 ntBASIC21.07■□□□□ 0.96
Cps1Q8C196 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cps1Q8C196 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC21.07■□□□□ 0.96
Cps1Q8C196 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cps1Q8C196 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Cps1Q8C196 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cps1Q8C196 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cps1Q8C196 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Cps1Q8C196 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Cps1Q8C196 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cps1Q8C196 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC21.06■□□□□ 0.96
Cps1Q8C196 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Cps1Q8C196 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cps1Q8C196 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cps1Q8C196 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cps1Q8C196 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cps1Q8C196 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cps1Q8C196 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cps1Q8C196 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cps1Q8C196 Gm44729-201ENSMUST00000206759 2052 ntBASIC21.06■□□□□ 0.96
Cps1Q8C196 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cps1Q8C196 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cps1Q8C196 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC21.05■□□□□ 0.96
Cps1Q8C196 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cps1Q8C196 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cps1Q8C196 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cps1Q8C196 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cps1Q8C196 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Cps1Q8C196 Gm13015-201ENSMUST00000118674 204 ntBASIC21.05■□□□□ 0.96
Cps1Q8C196 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC21.05■□□□□ 0.96
Cps1Q8C196 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cps1Q8C196 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC21.05■□□□□ 0.96
Cps1Q8C196 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cps1Q8C196 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC21.05■□□□□ 0.96
Cps1Q8C196 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC21.05■□□□□ 0.96
Cps1Q8C196 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Cps1Q8C196 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cps1Q8C196 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cps1Q8C196 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cps1Q8C196 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cps1Q8C196 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cps1Q8C196 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cps1Q8C196 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Cps1Q8C196 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cps1Q8C196 Gm45293-201ENSMUST00000209754 1812 ntBASIC21.05■□□□□ 0.96
Cps1Q8C196 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cps1Q8C196 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cps1Q8C196 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cps1Q8C196 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cps1Q8C196 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cps1Q8C196 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cps1Q8C196 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cps1Q8C196 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cps1Q8C196 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cps1Q8C196 Gm28265-201ENSMUST00000188201 2319 ntBASIC21.04■□□□□ 0.96
Cps1Q8C196 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cps1Q8C196 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cps1Q8C196 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
Cps1Q8C196 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cps1Q8C196 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cps1Q8C196 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cps1Q8C196 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC21.04■□□□□ 0.96
Cps1Q8C196 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC21.04■□□□□ 0.96
Cps1Q8C196 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC21.04■□□□□ 0.96
Cps1Q8C196 Gm27306-201ENSMUST00000183970 107 ntBASIC21.04■□□□□ 0.96
Cps1Q8C196 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cps1Q8C196 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC21.04■□□□□ 0.96
Cps1Q8C196 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cps1Q8C196 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cps1Q8C196 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cps1Q8C196 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cps1Q8C196 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cps1Q8C196 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC21.03■□□□□ 0.96
Cps1Q8C196 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC21.03■□□□□ 0.96
Cps1Q8C196 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC21.03■□□□□ 0.96
Cps1Q8C196 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cps1Q8C196 Gm9824-201ENSMUST00000178707 561 ntBASIC21.03■□□□□ 0.96
Cps1Q8C196 Mir7684-201ENSMUST00000183858 60 ntBASIC21.03■□□□□ 0.96
Cps1Q8C196 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC21.03■□□□□ 0.96
Cps1Q8C196 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cps1Q8C196 Gm2423-201ENSMUST00000074863 733 ntBASIC21.03■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms