Protein–RNA interactions for Protein: Q8BR37

Nhlrc1, E3 ubiquitin-protein ligase NHLRC1, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc1Q8BR37 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nhlrc1Q8BR37 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.26□□□□□ -0.45
Nhlrc1Q8BR37 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nhlrc1Q8BR37 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Nhlrc1Q8BR37 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nhlrc1Q8BR37 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nhlrc1Q8BR37 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Nhlrc1Q8BR37 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Nhlrc1Q8BR37 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Nhlrc1Q8BR37 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Gm4459-201ENSMUST00000118750 468 ntBASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Gm37935-201ENSMUST00000192012 982 ntBASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Slc35b2-202ENSMUST00000223987 1766 ntBASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nhlrc1Q8BR37 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Gm13418-201ENSMUST00000119097 944 ntBASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Mir6404-201ENSMUST00000183699 94 ntBASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Gm27525-201ENSMUST00000184465 107 ntBASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Gm6089-201ENSMUST00000197666 938 ntBASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 AV026068-213ENSMUST00000223675 1171 ntBASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nhlrc1Q8BR37 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 AC154527.4-201ENSMUST00000224364 1667 ntBASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 Gm8000-201ENSMUST00000188378 592 ntBASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nhlrc1Q8BR37 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms