Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim50Q810I2 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Trim50Q810I2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Trim50Q810I2 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim50Q810I2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim50Q810I2 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.39■□□□□ 0.05
Trim50Q810I2 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim50Q810I2 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trim50Q810I2 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim50Q810I2 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trim50Q810I2 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim50Q810I2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trim50Q810I2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim50Q810I2 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.39■□□□□ 0.05
Trim50Q810I2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trim50Q810I2 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.39■□□□□ 0.05
Trim50Q810I2 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.39■□□□□ 0.05
Trim50Q810I2 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.39■□□□□ 0.05
Trim50Q810I2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim50Q810I2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim50Q810I2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC15.39■□□□□ 0.05
Trim50Q810I2 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trim50Q810I2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.39■□□□□ 0.05
Trim50Q810I2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim50Q810I2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trim50Q810I2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim50Q810I2 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim50Q810I2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trim50Q810I2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim50Q810I2 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim50Q810I2 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim50Q810I2 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim50Q810I2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim50Q810I2 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim50Q810I2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim50Q810I2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim50Q810I2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim50Q810I2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.38■□□□□ 0.05
Trim50Q810I2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim50Q810I2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.38■□□□□ 0.05
Trim50Q810I2 Gm25406-201ENSMUST00000157599 105 ntBASIC15.38■□□□□ 0.05
Trim50Q810I2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.38■□□□□ 0.05
Trim50Q810I2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trim50Q810I2 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.38■□□□□ 0.05
Trim50Q810I2 Gm18669-201ENSMUST00000216049 778 ntBASIC15.38■□□□□ 0.05
Trim50Q810I2 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.38■□□□□ 0.05
Trim50Q810I2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim50Q810I2 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim50Q810I2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim50Q810I2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim50Q810I2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trim50Q810I2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim50Q810I2 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim50Q810I2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trim50Q810I2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Trim50Q810I2 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trim50Q810I2 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Trim50Q810I2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim50Q810I2 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Trim50Q810I2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim50Q810I2 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim50Q810I2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim50Q810I2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim50Q810I2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim50Q810I2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Trim50Q810I2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim50Q810I2 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.37■□□□□ 0.05
Trim50Q810I2 AC127349.1-201ENSMUST00000224590 266 ntBASIC15.37■□□□□ 0.05
Trim50Q810I2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim50Q810I2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim50Q810I2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim50Q810I2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim50Q810I2 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim50Q810I2 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim50Q810I2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Trim50Q810I2 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim50Q810I2 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim50Q810I2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim50Q810I2 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.37■□□□□ 0.05
Trim50Q810I2 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim50Q810I2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim50Q810I2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim50Q810I2 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim50Q810I2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim50Q810I2 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim50Q810I2 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Trim50Q810I2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim50Q810I2 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim50Q810I2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim50Q810I2 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.36■□□□□ 0.05
Trim50Q810I2 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim50Q810I2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim50Q810I2 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim50Q810I2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim50Q810I2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim50Q810I2 Gm15165-201ENSMUST00000118140 502 ntBASIC15.36■□□□□ 0.05
Trim50Q810I2 Gm12895-201ENSMUST00000122214 226 ntBASIC15.36■□□□□ 0.05
Trim50Q810I2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim50Q810I2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim50Q810I2 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms