Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc116Q80X53 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc116Q80X53 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Ccdc116Q80X53 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc116Q80X53 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc116Q80X53 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Ccdc116Q80X53 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.46■□□□□ 0.07
Ccdc116Q80X53 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc116Q80X53 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc116Q80X53 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc116Q80X53 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Ccdc116Q80X53 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc116Q80X53 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15.46■□□□□ 0.07
Ccdc116Q80X53 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.46■□□□□ 0.07
Ccdc116Q80X53 Gm6257-201ENSMUST00000163864 910 ntBASIC15.46■□□□□ 0.07
Ccdc116Q80X53 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.46■□□□□ 0.07
Ccdc116Q80X53 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.46■□□□□ 0.07
Ccdc116Q80X53 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc116Q80X53 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc116Q80X53 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc116Q80X53 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc116Q80X53 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc116Q80X53 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc116Q80X53 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc116Q80X53 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc116Q80X53 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc116Q80X53 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc116Q80X53 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC15.46■□□□□ 0.07
Ccdc116Q80X53 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc116Q80X53 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Ccdc116Q80X53 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Ccdc116Q80X53 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Gm27742-201ENSMUST00000184667 60 ntBASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Gm44487-201ENSMUST00000205145 325 ntBASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Ccdc116Q80X53 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Ccdc116Q80X53 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Ccdc116Q80X53 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Ccdc116Q80X53 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms