Protein–RNA interactions for Protein: Q64729

Tgfbr1, TGF-beta receptor type-1, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr1Q64729 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tgfbr1Q64729 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tgfbr1Q64729 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Tgfbr1Q64729 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Tgfbr1Q64729 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Tgfbr1Q64729 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Tgfbr1Q64729 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Tgfbr1Q64729 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Spsb2-203ENSMUST00000112473 1322 ntBASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Gm11336-201ENSMUST00000118168 334 ntBASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Gm22240-201ENSMUST00000175225 82 ntBASIC12.92□□□□□ -0.34
Tgfbr1Q64729 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Gm7213-201ENSMUST00000215977 950 ntBASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Tgfbr1Q64729 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tgfbr1Q64729 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tgfbr1Q64729 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tgfbr1Q64729 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tgfbr1Q64729 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tgfbr1Q64729 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tgfbr1Q64729 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tgfbr1Q64729 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Tgfbr1Q64729 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC12.91□□□□□ -0.34
Tgfbr1Q64729 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.91□□□□□ -0.34
Tgfbr1Q64729 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC12.91□□□□□ -0.34
Tgfbr1Q64729 Gm36967-201ENSMUST00000193814 266 ntBASIC12.91□□□□□ -0.34
Tgfbr1Q64729 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.91□□□□□ -0.34
Tgfbr1Q64729 Gm30025-201ENSMUST00000218555 728 ntBASIC12.91□□□□□ -0.34
Tgfbr1Q64729 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tgfbr1Q64729 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tgfbr1Q64729 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tgfbr1Q64729 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tgfbr1Q64729 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tgfbr1Q64729 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Tgfbr1Q64729 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tgfbr1Q64729 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tgfbr1Q64729 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.91□□□□□ -0.34
Tgfbr1Q64729 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tgfbr1Q64729 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms