Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cln3Q61124 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cln3Q61124 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.23■□□□□ 0.35
Cln3Q61124 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cln3Q61124 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cln3Q61124 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Cln3Q61124 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cln3Q61124 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cln3Q61124 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cln3Q61124 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cln3Q61124 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cln3Q61124 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cln3Q61124 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cln3Q61124 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cln3Q61124 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cln3Q61124 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cln3Q61124 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cln3Q61124 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cln3Q61124 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC17.22■□□□□ 0.35
Cln3Q61124 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cln3Q61124 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cln3Q61124 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cln3Q61124 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cln3Q61124 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cln3Q61124 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cln3Q61124 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Cln3Q61124 Gm14057-201ENSMUST00000120631 482 ntBASIC17.22■□□□□ 0.35
Cln3Q61124 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Cln3Q61124 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.22■□□□□ 0.35
Cln3Q61124 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.22■□□□□ 0.35
Cln3Q61124 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Cln3Q61124 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cln3Q61124 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cln3Q61124 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cln3Q61124 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cln3Q61124 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cln3Q61124 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cln3Q61124 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.22■□□□□ 0.35
Cln3Q61124 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cln3Q61124 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.21■□□□□ 0.35
Cln3Q61124 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.21■□□□□ 0.35
Cln3Q61124 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cln3Q61124 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cln3Q61124 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Cln3Q61124 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cln3Q61124 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cln3Q61124 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cln3Q61124 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cln3Q61124 Gm5312-201ENSMUST00000203728 547 ntBASIC17.21■□□□□ 0.35
Cln3Q61124 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cln3Q61124 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Cln3Q61124 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cln3Q61124 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cln3Q61124 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cln3Q61124 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cln3Q61124 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cln3Q61124 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cln3Q61124 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cln3Q61124 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cln3Q61124 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cln3Q61124 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cln3Q61124 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cln3Q61124 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cln3Q61124 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cln3Q61124 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.2■□□□□ 0.34
Cln3Q61124 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.2■□□□□ 0.34
Cln3Q61124 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC17.2■□□□□ 0.34
Cln3Q61124 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.2■□□□□ 0.34
Cln3Q61124 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cln3Q61124 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cln3Q61124 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Cln3Q61124 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cln3Q61124 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cln3Q61124 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cln3Q61124 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cln3Q61124 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cln3Q61124 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.2■□□□□ 0.34
Cln3Q61124 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cln3Q61124 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cln3Q61124 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cln3Q61124 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cln3Q61124 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cln3Q61124 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cln3Q61124 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
Cln3Q61124 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cln3Q61124 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cln3Q61124 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cln3Q61124 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.19■□□□□ 0.34
Cln3Q61124 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.19■□□□□ 0.34
Cln3Q61124 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cln3Q61124 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.19■□□□□ 0.34
Cln3Q61124 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cln3Q61124 Rpph1-201ENSMUST00000175096 319 ntBASIC17.19■□□□□ 0.34
Cln3Q61124 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cln3Q61124 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.19■□□□□ 0.34
Cln3Q61124 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cln3Q61124 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cln3Q61124 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cln3Q61124 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cln3Q61124 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms