Protein–RNA interactions for Protein: Q5R1I3

Trav7-2, T cell receptor alpha variable 7-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-2Q5R1I3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav7-2Q5R1I3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Gm10710-201ENSMUST00000047876 3971 ntBASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav7-2Q5R1I3 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.77□□□□□ -0.52
Trav7-2Q5R1I3 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav7-2Q5R1I3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav7-2Q5R1I3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav7-2Q5R1I3 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav7-2Q5R1I3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav7-2Q5R1I3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav7-2Q5R1I3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7-2Q5R1I3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Trav7-2Q5R1I3 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7-2Q5R1I3 Gm25016-201ENSMUST00000158399 131 ntBASIC11.77□□□□□ -0.53
Trav7-2Q5R1I3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav7-2Q5R1I3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Trav7-2Q5R1I3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7-2Q5R1I3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Trav7-2Q5R1I3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7-2Q5R1I3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav7-2Q5R1I3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav7-2Q5R1I3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC11.77□□□□□ -0.53
Trav7-2Q5R1I3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav7-2Q5R1I3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav7-2Q5R1I3 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7-2Q5R1I3 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7-2Q5R1I3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7-2Q5R1I3 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav7-2Q5R1I3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7-2Q5R1I3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7-2Q5R1I3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7-2Q5R1I3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7-2Q5R1I3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trav7-2Q5R1I3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav7-2Q5R1I3 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms