Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 Mir2861-201ENSMUST00000175539 82 ntBASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 Gm29241-201ENSMUST00000189260 1096 ntBASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav3-3Q5R1C3 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trav3-3Q5R1C3 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Trav3-3Q5R1C3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav3-3Q5R1C3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav3-3Q5R1C3 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav3-3Q5R1C3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav3-3Q5R1C3 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav3-3Q5R1C3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Trav3-3Q5R1C3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav3-3Q5R1C3 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav3-3Q5R1C3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Tfap2a-203ENSMUST00000223869 2037 ntBASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Gm11927-201ENSMUST00000118472 759 ntBASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Gm27405-201ENSMUST00000184201 112 ntBASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Trav3-3Q5R1C3 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Gm2559-201ENSMUST00000201323 363 ntBASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 BC037039-201ENSMUST00000192003 2205 ntBASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav3-3Q5R1C3 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms