Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.8□□□□□ -0.36
Sssca1P56873 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sssca1P56873 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sssca1P56873 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sssca1P56873 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sssca1P56873 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sssca1P56873 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sssca1P56873 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Sssca1P56873 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sssca1P56873 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sssca1P56873 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sssca1P56873 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sssca1P56873 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sssca1P56873 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sssca1P56873 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sssca1P56873 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sssca1P56873 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sssca1P56873 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sssca1P56873 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sssca1P56873 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sssca1P56873 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sssca1P56873 Gm38327-201ENSMUST00000195852 1755 ntBASIC12.79□□□□□ -0.36
Sssca1P56873 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sssca1P56873 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Sssca1P56873 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sssca1P56873 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sssca1P56873 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sssca1P56873 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sssca1P56873 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Sssca1P56873 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Sssca1P56873 Gm15039-201ENSMUST00000118914 875 ntBASIC12.79□□□□□ -0.36
Sssca1P56873 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.79□□□□□ -0.36
Sssca1P56873 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sssca1P56873 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sssca1P56873 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sssca1P56873 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sssca1P56873 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sssca1P56873 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Sssca1P56873 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.79□□□□□ -0.36
Sssca1P56873 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sssca1P56873 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sssca1P56873 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sssca1P56873 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sssca1P56873 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Sssca1P56873 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.79□□□□□ -0.36
Sssca1P56873 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Sssca1P56873 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sssca1P56873 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sssca1P56873 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Sssca1P56873 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sssca1P56873 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sssca1P56873 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sssca1P56873 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sssca1P56873 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sssca1P56873 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sssca1P56873 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sssca1P56873 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sssca1P56873 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sssca1P56873 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sssca1P56873 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sssca1P56873 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sssca1P56873 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sssca1P56873 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sssca1P56873 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sssca1P56873 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sssca1P56873 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sssca1P56873 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.78□□□□□ -0.36
Sssca1P56873 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sssca1P56873 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sssca1P56873 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sssca1P56873 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sssca1P56873 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sssca1P56873 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sssca1P56873 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sssca1P56873 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC12.78□□□□□ -0.36
Sssca1P56873 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sssca1P56873 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sssca1P56873 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Sssca1P56873 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sssca1P56873 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sssca1P56873 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Sssca1P56873 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
Sssca1P56873 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.77□□□□□ -0.37
Sssca1P56873 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sssca1P56873 Gm3272-201ENSMUST00000181181 1229 ntBASIC12.77□□□□□ -0.37
Sssca1P56873 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.77□□□□□ -0.37
Sssca1P56873 Gm29994-201ENSMUST00000195495 1193 ntBASIC12.77□□□□□ -0.37
Sssca1P56873 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sssca1P56873 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sssca1P56873 Gm10566-201ENSMUST00000086739 996 ntBASIC12.77□□□□□ -0.37
Sssca1P56873 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sssca1P56873 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.77□□□□□ -0.37
Sssca1P56873 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Sssca1P56873 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Sssca1P56873 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sssca1P56873 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Sssca1P56873 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sssca1P56873 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Sssca1P56873 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Sssca1P56873 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms