Protein–RNA interactions for Protein: P48298

Ccl11, Eotaxin, mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl11P48298 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl11P48298 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl11P48298 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl11P48298 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl11P48298 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ccl11P48298 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC13.33□□□□□ -0.27
Ccl11P48298 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Ccl11P48298 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ccl11P48298 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl11P48298 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl11P48298 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl11P48298 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl11P48298 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl11P48298 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl11P48298 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.33□□□□□ -0.28
Ccl11P48298 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl11P48298 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.33□□□□□ -0.28
Ccl11P48298 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC13.33□□□□□ -0.28
Ccl11P48298 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.33□□□□□ -0.28
Ccl11P48298 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl11P48298 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl11P48298 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl11P48298 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl11P48298 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl11P48298 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl11P48298 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Ccl11P48298 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl11P48298 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Ccl11P48298 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl11P48298 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl11P48298 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl11P48298 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl11P48298 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ccl11P48298 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.32□□□□□ -0.28
Ccl11P48298 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccl11P48298 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ccl11P48298 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.32□□□□□ -0.28
Ccl11P48298 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Gm8000-201ENSMUST00000188378 592 ntBASIC13.32□□□□□ -0.28
Ccl11P48298 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.32□□□□□ -0.28
Ccl11P48298 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.32□□□□□ -0.28
Ccl11P48298 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ccl11P48298 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ccl11P48298 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.32□□□□□ -0.28
Ccl11P48298 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ccl11P48298 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Ccl11P48298 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Ccl11P48298 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ccl11P48298 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ccl11P48298 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.31□□□□□ -0.28
Ccl11P48298 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
Ccl11P48298 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.31□□□□□ -0.28
Ccl11P48298 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ccl11P48298 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms