Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxc9P09633 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hoxc9P09633 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hoxc9P09633 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hoxc9P09633 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hoxc9P09633 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hoxc9P09633 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hoxc9P09633 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Hoxc9P09633 Gm7669-201ENSMUST00000210184 1603 ntBASIC20.36■□□□□ 0.85
Hoxc9P09633 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Hoxc9P09633 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hoxc9P09633 Gm16198-201ENSMUST00000118766 670 ntBASIC20.36■□□□□ 0.85
Hoxc9P09633 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC20.36■□□□□ 0.85
Hoxc9P09633 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hoxc9P09633 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC20.36■□□□□ 0.85
Hoxc9P09633 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hoxc9P09633 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Hoxc9P09633 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hoxc9P09633 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hoxc9P09633 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Hoxc9P09633 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hoxc9P09633 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Hoxc9P09633 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hoxc9P09633 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Hoxc9P09633 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hoxc9P09633 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hoxc9P09633 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hoxc9P09633 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hoxc9P09633 Gm13337-201ENSMUST00000119183 1594 ntBASIC20.35■□□□□ 0.85
Hoxc9P09633 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hoxc9P09633 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hoxc9P09633 Gm5628-201ENSMUST00000222318 1049 ntBASIC20.35■□□□□ 0.85
Hoxc9P09633 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Hoxc9P09633 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hoxc9P09633 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Hoxc9P09633 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hoxc9P09633 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hoxc9P09633 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hoxc9P09633 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hoxc9P09633 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxc9P09633 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxc9P09633 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxc9P09633 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC20.34■□□□□ 0.85
Hoxc9P09633 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxc9P09633 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxc9P09633 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Hoxc9P09633 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxc9P09633 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Hoxc9P09633 Mir6990-201ENSMUST00000183724 91 ntBASIC20.34■□□□□ 0.85
Hoxc9P09633 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxc9P09633 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC20.34■□□□□ 0.85
Hoxc9P09633 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC20.34■□□□□ 0.85
Hoxc9P09633 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC20.34■□□□□ 0.85
Hoxc9P09633 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxc9P09633 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxc9P09633 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Hoxc9P09633 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxc9P09633 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxc9P09633 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Hoxc9P09633 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxc9P09633 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxc9P09633 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxc9P09633 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.34■□□□□ 0.85
Hoxc9P09633 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxc9P09633 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Hoxc9P09633 Gm42900-201ENSMUST00000197184 2167 ntBASIC20.34■□□□□ 0.85
Hoxc9P09633 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxc9P09633 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxc9P09633 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hoxc9P09633 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hoxc9P09633 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Hoxc9P09633 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Hoxc9P09633 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC20.33■□□□□ 0.85
Hoxc9P09633 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Hoxc9P09633 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC20.33■□□□□ 0.85
Hoxc9P09633 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC20.33■□□□□ 0.85
Hoxc9P09633 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Hoxc9P09633 AC160980.1-201ENSMUST00000224136 970 ntBASIC20.33■□□□□ 0.85
Hoxc9P09633 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hoxc9P09633 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Hoxc9P09633 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hoxc9P09633 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Hoxc9P09633 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Hoxc9P09633 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hoxc9P09633 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hoxc9P09633 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hoxc9P09633 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Hoxc9P09633 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Hoxc9P09633 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC20.32■□□□□ 0.84
Hoxc9P09633 AC157650.3-201ENSMUST00000225058 1476 ntBASIC20.32■□□□□ 0.84
Hoxc9P09633 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxc9P09633 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxc9P09633 Gm18889-201ENSMUST00000174284 929 ntBASIC20.32■□□□□ 0.84
Hoxc9P09633 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxc9P09633 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC20.32■□□□□ 0.84
Hoxc9P09633 Gm43474-201ENSMUST00000196415 774 ntBASIC20.32■□□□□ 0.84
Hoxc9P09633 Gpr146-202ENSMUST00000053120 1040 ntBASIC20.32■□□□□ 0.84
Hoxc9P09633 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Hoxc9P09633 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.32■□□□□ 0.84
Hoxc9P09633 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms