Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC11.56□□□□□ -0.56
TcraP01849 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC11.56□□□□□ -0.56
TcraP01849 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC11.56□□□□□ -0.56
TcraP01849 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
TcraP01849 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC11.56□□□□□ -0.56
TcraP01849 Gm18025-201ENSMUST00000221733 862 ntBASIC11.56□□□□□ -0.56
TcraP01849 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
TcraP01849 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
TcraP01849 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
TcraP01849 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.56□□□□□ -0.56
TcraP01849 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
TcraP01849 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC11.55□□□□□ -0.56
TcraP01849 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TcraP01849 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
TcraP01849 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TcraP01849 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TcraP01849 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
TcraP01849 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TcraP01849 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TcraP01849 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TcraP01849 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11.55□□□□□ -0.56
TcraP01849 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
TcraP01849 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC11.55□□□□□ -0.56
TcraP01849 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TcraP01849 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC11.55□□□□□ -0.56
TcraP01849 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC11.55□□□□□ -0.56
TcraP01849 Gm42545-201ENSMUST00000202755 922 ntBASIC11.55□□□□□ -0.56
TcraP01849 AC166341.7-201ENSMUST00000221698 126 ntBASIC11.55□□□□□ -0.56
TcraP01849 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
TcraP01849 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC11.55□□□□□ -0.56
TcraP01849 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TcraP01849 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
TcraP01849 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
TcraP01849 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TcraP01849 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TcraP01849 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.55□□□□□ -0.56
TcraP01849 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
TcraP01849 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
TcraP01849 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
TcraP01849 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
TcraP01849 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TcraP01849 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.55□□□□□ -0.56
TcraP01849 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
TcraP01849 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TcraP01849 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TcraP01849 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TcraP01849 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TcraP01849 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
TcraP01849 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
TcraP01849 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
TcraP01849 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TcraP01849 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TcraP01849 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TcraP01849 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TcraP01849 Nrn1-203ENSMUST00000223611 1443 ntBASIC11.54□□□□□ -0.56
TcraP01849 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TcraP01849 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TcraP01849 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
TcraP01849 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TcraP01849 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TcraP01849 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
TcraP01849 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TcraP01849 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
TcraP01849 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TcraP01849 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TcraP01849 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
TcraP01849 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
TcraP01849 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
TcraP01849 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TcraP01849 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TcraP01849 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
TcraP01849 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
TcraP01849 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TcraP01849 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TcraP01849 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC11.54□□□□□ -0.56
TcraP01849 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TcraP01849 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TcraP01849 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
TcraP01849 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
TcraP01849 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
TcraP01849 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms