Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Nrn1-204ENSMUST00000224323 1779 ntBASIC17.31■□□□□ 0.36
Trdmt1O55055 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trdmt1O55055 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trdmt1O55055 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trdmt1O55055 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trdmt1O55055 Gm6226-201ENSMUST00000117765 1146 ntBASIC17.31■□□□□ 0.36
Trdmt1O55055 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trdmt1O55055 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.31■□□□□ 0.36
Trdmt1O55055 Thap2-203ENSMUST00000218989 527 ntBASIC17.31■□□□□ 0.36
Trdmt1O55055 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.31■□□□□ 0.36
Trdmt1O55055 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trdmt1O55055 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trdmt1O55055 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trdmt1O55055 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trdmt1O55055 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.31■□□□□ 0.36
Trdmt1O55055 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trdmt1O55055 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.31■□□□□ 0.36
Trdmt1O55055 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trdmt1O55055 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trdmt1O55055 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trdmt1O55055 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
Trdmt1O55055 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trdmt1O55055 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trdmt1O55055 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trdmt1O55055 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trdmt1O55055 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Trdmt1O55055 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trdmt1O55055 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trdmt1O55055 Gm13332-201ENSMUST00000120451 1398 ntBASIC17.3■□□□□ 0.36
Trdmt1O55055 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trdmt1O55055 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trdmt1O55055 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.3■□□□□ 0.36
Trdmt1O55055 Mir6956-201ENSMUST00000183598 62 ntBASIC17.3■□□□□ 0.36
Trdmt1O55055 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trdmt1O55055 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trdmt1O55055 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Trdmt1O55055 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trdmt1O55055 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.3■□□□□ 0.36
Trdmt1O55055 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trdmt1O55055 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trdmt1O55055 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trdmt1O55055 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trdmt1O55055 Gm29361-201ENSMUST00000183323 2000 ntBASIC17.3■□□□□ 0.36
Trdmt1O55055 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trdmt1O55055 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trdmt1O55055 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trdmt1O55055 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trdmt1O55055 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trdmt1O55055 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.29■□□□□ 0.36
Trdmt1O55055 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trdmt1O55055 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trdmt1O55055 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trdmt1O55055 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Trdmt1O55055 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trdmt1O55055 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trdmt1O55055 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trdmt1O55055 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC17.29■□□□□ 0.36
Trdmt1O55055 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC17.29■□□□□ 0.36
Trdmt1O55055 Gm44335-201ENSMUST00000196879 141 ntBASIC17.29■□□□□ 0.36
Trdmt1O55055 Gm44297-201ENSMUST00000198304 141 ntBASIC17.29■□□□□ 0.36
Trdmt1O55055 Gm44346-201ENSMUST00000198851 141 ntBASIC17.29■□□□□ 0.36
Trdmt1O55055 AC159114.1-201ENSMUST00000220349 266 ntBASIC17.29■□□□□ 0.36
Trdmt1O55055 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trdmt1O55055 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trdmt1O55055 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trdmt1O55055 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trdmt1O55055 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trdmt1O55055 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Trdmt1O55055 Gm5184-201ENSMUST00000220417 1702 ntBASIC17.29■□□□□ 0.36
Trdmt1O55055 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trdmt1O55055 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trdmt1O55055 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Trdmt1O55055 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trdmt1O55055 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trdmt1O55055 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trdmt1O55055 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trdmt1O55055 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Trdmt1O55055 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trdmt1O55055 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trdmt1O55055 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trdmt1O55055 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trdmt1O55055 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trdmt1O55055 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trdmt1O55055 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trdmt1O55055 Gm13616-201ENSMUST00000120600 222 ntBASIC17.28■□□□□ 0.36
Trdmt1O55055 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.28■□□□□ 0.36
Trdmt1O55055 Gm5312-201ENSMUST00000203728 547 ntBASIC17.28■□□□□ 0.36
Trdmt1O55055 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trdmt1O55055 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Trdmt1O55055 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trdmt1O55055 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trdmt1O55055 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trdmt1O55055 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trdmt1O55055 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trdmt1O55055 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trdmt1O55055 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.28■□□□□ 0.36
Trdmt1O55055 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trdmt1O55055 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trdmt1O55055 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trdmt1O55055 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms