Protein–RNA interactions for Protein: O54982

Kcnu1, Potassium channel subfamily U member 1, mousemouse

Predictions only

Length 1,121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcnu1O54982 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Kcnu1O54982 Gm27742-201ENSMUST00000184667 60 ntBASIC16.82■□□□□ 0.28
Kcnu1O54982 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.82■□□□□ 0.28
Kcnu1O54982 AC158538.1-201ENSMUST00000225870 294 ntBASIC16.82■□□□□ 0.28
Kcnu1O54982 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Kcnu1O54982 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Kcnu1O54982 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Kcnu1O54982 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Kcnu1O54982 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Kcnu1O54982 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Kcnu1O54982 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Kcnu1O54982 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Kcnu1O54982 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Kcnu1O54982 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Kcnu1O54982 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Kcnu1O54982 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Kcnu1O54982 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Kcnu1O54982 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Kcnu1O54982 Mir3081-201ENSMUST00000175305 84 ntBASIC16.81■□□□□ 0.28
Kcnu1O54982 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Kcnu1O54982 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.81■□□□□ 0.28
Kcnu1O54982 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Kcnu1O54982 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Kcnu1O54982 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Kcnu1O54982 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Kcnu1O54982 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Kcnu1O54982 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Kcnu1O54982 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Kcnu1O54982 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Kcnu1O54982 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcnu1O54982 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcnu1O54982 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcnu1O54982 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcnu1O54982 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcnu1O54982 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcnu1O54982 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Kcnu1O54982 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Kcnu1O54982 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcnu1O54982 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcnu1O54982 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Kcnu1O54982 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcnu1O54982 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Kcnu1O54982 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Kcnu1O54982 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC16.8■□□□□ 0.28
Kcnu1O54982 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcnu1O54982 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcnu1O54982 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcnu1O54982 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.8■□□□□ 0.28
Kcnu1O54982 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.8■□□□□ 0.28
Kcnu1O54982 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Kcnu1O54982 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Kcnu1O54982 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.8■□□□□ 0.28
Kcnu1O54982 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcnu1O54982 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcnu1O54982 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcnu1O54982 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Kcnu1O54982 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcnu1O54982 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcnu1O54982 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcnu1O54982 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcnu1O54982 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Kcnu1O54982 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Kcnu1O54982 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcnu1O54982 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.79■□□□□ 0.28
Kcnu1O54982 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcnu1O54982 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcnu1O54982 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcnu1O54982 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcnu1O54982 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcnu1O54982 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcnu1O54982 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcnu1O54982 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Kcnu1O54982 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcnu1O54982 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Kcnu1O54982 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.79■□□□□ 0.28
Kcnu1O54982 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Kcnu1O54982 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcnu1O54982 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.79■□□□□ 0.28
Kcnu1O54982 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
Kcnu1O54982 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.79■□□□□ 0.28
Kcnu1O54982 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcnu1O54982 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcnu1O54982 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcnu1O54982 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcnu1O54982 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcnu1O54982 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcnu1O54982 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.79■□□□□ 0.28
Kcnu1O54982 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Kcnu1O54982 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Kcnu1O54982 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Kcnu1O54982 BC037039-201ENSMUST00000192003 2205 ntBASIC16.78■□□□□ 0.28
Kcnu1O54982 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Kcnu1O54982 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Kcnu1O54982 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Kcnu1O54982 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Kcnu1O54982 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Kcnu1O54982 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Kcnu1O54982 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Kcnu1O54982 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.78■□□□□ 0.28
Kcnu1O54982 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms