Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf2O35218 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf2O35218 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.92■□□□□ 0.3
Cpsf2O35218 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.92■□□□□ 0.3
Cpsf2O35218 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.92■□□□□ 0.3
Cpsf2O35218 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf2O35218 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf2O35218 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf2O35218 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf2O35218 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf2O35218 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf2O35218 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf2O35218 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.92■□□□□ 0.3
Cpsf2O35218 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cpsf2O35218 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf2O35218 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cpsf2O35218 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf2O35218 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.91■□□□□ 0.3
Cpsf2O35218 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.91■□□□□ 0.3
Cpsf2O35218 Gm11860-201ENSMUST00000122346 1010 ntBASIC16.91■□□□□ 0.3
Cpsf2O35218 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf2O35218 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf2O35218 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC16.91■□□□□ 0.3
Cpsf2O35218 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cpsf2O35218 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Cpsf2O35218 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf2O35218 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf2O35218 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf2O35218 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf2O35218 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf2O35218 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.91■□□□□ 0.3
Cpsf2O35218 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.91■□□□□ 0.3
Cpsf2O35218 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf2O35218 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cpsf2O35218 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.91■□□□□ 0.3
Cpsf2O35218 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf2O35218 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf2O35218 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Cpsf2O35218 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf2O35218 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Cpsf2O35218 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf2O35218 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Cpsf2O35218 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Cpsf2O35218 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf2O35218 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf2O35218 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf2O35218 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf2O35218 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf2O35218 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf2O35218 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf2O35218 Gm10052-201ENSMUST00000168019 960 ntBASIC16.9■□□□□ 0.3
Cpsf2O35218 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.9■□□□□ 0.3
Cpsf2O35218 Gm18032-201ENSMUST00000222541 538 ntBASIC16.9■□□□□ 0.3
Cpsf2O35218 Gm7729-201ENSMUST00000050143 801 ntBASIC16.9■□□□□ 0.3
Cpsf2O35218 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf2O35218 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf2O35218 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf2O35218 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf2O35218 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cpsf2O35218 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
Cpsf2O35218 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cpsf2O35218 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Cpsf2O35218 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf2O35218 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cpsf2O35218 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf2O35218 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf2O35218 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf2O35218 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf2O35218 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.89■□□□□ 0.29
Cpsf2O35218 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf2O35218 Mir770-201ENSMUST00000103252 94 ntBASIC16.89■□□□□ 0.29
Cpsf2O35218 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.89■□□□□ 0.29
Cpsf2O35218 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf2O35218 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf2O35218 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf2O35218 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf2O35218 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Cpsf2O35218 Gm9987-201ENSMUST00000069768 567 ntBASIC16.89■□□□□ 0.29
Cpsf2O35218 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf2O35218 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cpsf2O35218 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cpsf2O35218 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf2O35218 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf2O35218 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC16.89■□□□□ 0.29
Cpsf2O35218 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf2O35218 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Cpsf2O35218 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf2O35218 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf2O35218 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cpsf2O35218 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf2O35218 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf2O35218 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf2O35218 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf2O35218 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf2O35218 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf2O35218 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf2O35218 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf2O35218 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Cpsf2O35218 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Cpsf2O35218 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms