Protein–RNA interactions for Protein: J3QMK2

Bbip1, BBSome-interacting protein 1, mousemouse

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bbip1J3QMK2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Bbip1J3QMK2 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.3□□□□□ -0.12
Bbip1J3QMK2 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Bbip1J3QMK2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Prob1-201ENSMUST00000097619 3021 ntBASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Bbip1J3QMK2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 AA414768-201ENSMUST00000121924 1257 ntBASIC14.28□□□□□ -0.12
Bbip1J3QMK2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Bbip1J3QMK2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms