Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Cpsf4lE9Q2N0 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Cpsf4lE9Q2N0 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Cpsf4lE9Q2N0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Gm24589-201ENSMUST00000116692 94 ntBASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Gm27459-201ENSMUST00000184860 107 ntBASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Gm43347-201ENSMUST00000200226 580 ntBASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Gm18622-201ENSMUST00000219361 595 ntBASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Cpsf4lE9Q2N0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms