Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim30cD3YVI9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim30cD3YVI9 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trim30cD3YVI9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim30cD3YVI9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim30cD3YVI9 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim30cD3YVI9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim30cD3YVI9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim30cD3YVI9 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Trim30cD3YVI9 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim30cD3YVI9 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.28■□□□□ 0.36
Trim30cD3YVI9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim30cD3YVI9 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim30cD3YVI9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Trim30cD3YVI9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim30cD3YVI9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim30cD3YVI9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim30cD3YVI9 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trim30cD3YVI9 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim30cD3YVI9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.28■□□□□ 0.36
Trim30cD3YVI9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim30cD3YVI9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim30cD3YVI9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim30cD3YVI9 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim30cD3YVI9 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim30cD3YVI9 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.28■□□□□ 0.36
Trim30cD3YVI9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim30cD3YVI9 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim30cD3YVI9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim30cD3YVI9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim30cD3YVI9 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim30cD3YVI9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim30cD3YVI9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim30cD3YVI9 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim30cD3YVI9 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim30cD3YVI9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trim30cD3YVI9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Trim30cD3YVI9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim30cD3YVI9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
Trim30cD3YVI9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim30cD3YVI9 Gm14859-201ENSMUST00000117752 357 ntBASIC17.27■□□□□ 0.36
Trim30cD3YVI9 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim30cD3YVI9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim30cD3YVI9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim30cD3YVI9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim30cD3YVI9 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.27■□□□□ 0.36
Trim30cD3YVI9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim30cD3YVI9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.27■□□□□ 0.36
Trim30cD3YVI9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim30cD3YVI9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim30cD3YVI9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trim30cD3YVI9 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim30cD3YVI9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim30cD3YVI9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim30cD3YVI9 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim30cD3YVI9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trim30cD3YVI9 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trim30cD3YVI9 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30cD3YVI9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30cD3YVI9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim30cD3YVI9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim30cD3YVI9 Gm7284-201ENSMUST00000131667 944 ntBASIC17.26■□□□□ 0.35
Trim30cD3YVI9 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Trim30cD3YVI9 Gm44450-201ENSMUST00000199528 114 ntBASIC17.26■□□□□ 0.35
Trim30cD3YVI9 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Trim30cD3YVI9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30cD3YVI9 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim30cD3YVI9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trim30cD3YVI9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Trim30cD3YVI9 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30cD3YVI9 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim30cD3YVI9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30cD3YVI9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30cD3YVI9 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trim30cD3YVI9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30cD3YVI9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30cD3YVI9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trim30cD3YVI9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Trim30cD3YVI9 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30cD3YVI9 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trim30cD3YVI9 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Trim30cD3YVI9 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim30cD3YVI9 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30cD3YVI9 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30cD3YVI9 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.25■□□□□ 0.35
Trim30cD3YVI9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30cD3YVI9 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trim30cD3YVI9 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.25■□□□□ 0.35
Trim30cD3YVI9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30cD3YVI9 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Trim30cD3YVI9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30cD3YVI9 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim30cD3YVI9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim30cD3YVI9 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim30cD3YVI9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim30cD3YVI9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trim30cD3YVI9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Trim30cD3YVI9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim30cD3YVI9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim30cD3YVI9 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms