Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12-1A0N8R1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12-1A0N8R1 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12-1A0N8R1 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12-1A0N8R1 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12-1A0N8R1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trav12-1A0N8R1 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12-1A0N8R1 Gm6257-201ENSMUST00000163864 910 ntBASIC13.2□□□□□ -0.3
Trav12-1A0N8R1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Trav12-1A0N8R1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12-1A0N8R1 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12-1A0N8R1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav12-1A0N8R1 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12-1A0N8R1 BC037039-201ENSMUST00000192003 2205 ntBASIC13.2□□□□□ -0.3
Trav12-1A0N8R1 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12-1A0N8R1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12-1A0N8R1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12-1A0N8R1 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav12-1A0N8R1 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav12-1A0N8R1 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12-1A0N8R1 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12-1A0N8R1 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12-1A0N8R1 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12-1A0N8R1 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12-1A0N8R1 Gm43799-201ENSMUST00000201845 579 ntBASIC13.19□□□□□ -0.3
Trav12-1A0N8R1 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.19□□□□□ -0.3
Trav12-1A0N8R1 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12-1A0N8R1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12-1A0N8R1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav12-1A0N8R1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav12-1A0N8R1 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12-1A0N8R1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12-1A0N8R1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12-1A0N8R1 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12-1A0N8R1 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12-1A0N8R1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
Trav12-1A0N8R1 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12-1A0N8R1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12-1A0N8R1 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12-1A0N8R1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav12-1A0N8R1 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.19□□□□□ -0.3
Trav12-1A0N8R1 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-1A0N8R1 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-1A0N8R1 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-1A0N8R1 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-1A0N8R1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-1A0N8R1 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Trav12-1A0N8R1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav12-1A0N8R1 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.18□□□□□ -0.3
Trav12-1A0N8R1 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav12-1A0N8R1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-1A0N8R1 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-1A0N8R1 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-1A0N8R1 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-1A0N8R1 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-1A0N8R1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-1A0N8R1 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.18□□□□□ -0.3
Trav12-1A0N8R1 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav12-1A0N8R1 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Trav12-1A0N8R1 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-1A0N8R1 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-1A0N8R1 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav12-1A0N8R1 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Gm22697-201ENSMUST00000175194 63 ntBASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav12-1A0N8R1 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav12-1A0N8R1 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms