Protein–RNA interactions for Protein: A0A504

Smim17, MCG116182, isoform CRA_b, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim17A0A504 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smim17A0A504 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Smim17A0A504 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim17A0A504 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim17A0A504 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim17A0A504 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim17A0A504 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim17A0A504 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smim17A0A504 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim17A0A504 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim17A0A504 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim17A0A504 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.37□□□□□ -0.11
Smim17A0A504 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim17A0A504 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.37□□□□□ -0.11
Smim17A0A504 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Smim17A0A504 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim17A0A504 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.37□□□□□ -0.11
Smim17A0A504 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim17A0A504 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Smim17A0A504 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smim17A0A504 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smim17A0A504 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smim17A0A504 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.36□□□□□ -0.11
Smim17A0A504 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.36□□□□□ -0.11
Smim17A0A504 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smim17A0A504 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.36□□□□□ -0.11
Smim17A0A504 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Smim17A0A504 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smim17A0A504 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.36□□□□□ -0.11
Smim17A0A504 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Smim17A0A504 Gm15375-201ENSMUST00000119510 849 ntBASIC14.36□□□□□ -0.11
Smim17A0A504 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.36□□□□□ -0.11
Smim17A0A504 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smim17A0A504 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smim17A0A504 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smim17A0A504 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Smim17A0A504 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smim17A0A504 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Smim17A0A504 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Smim17A0A504 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim17A0A504 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim17A0A504 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim17A0A504 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim17A0A504 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim17A0A504 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim17A0A504 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smim17A0A504 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim17A0A504 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim17A0A504 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim17A0A504 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim17A0A504 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim17A0A504 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.35□□□□□ -0.11
Smim17A0A504 Gm6211-202ENSMUST00000167849 925 ntBASIC14.35□□□□□ -0.11
Smim17A0A504 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.35□□□□□ -0.11
Smim17A0A504 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim17A0A504 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim17A0A504 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smim17A0A504 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smim17A0A504 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Smim17A0A504 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Smim17A0A504 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Smim17A0A504 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim17A0A504 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Smim17A0A504 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smim17A0A504 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smim17A0A504 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim17A0A504 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim17A0A504 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.34□□□□□ -0.11
Smim17A0A504 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim17A0A504 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim17A0A504 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim17A0A504 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim17A0A504 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smim17A0A504 Gm24841-201ENSMUST00000158676 357 ntBASIC14.34□□□□□ -0.11
Smim17A0A504 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smim17A0A504 Gm42569-201ENSMUST00000200539 472 ntBASIC14.34□□□□□ -0.11
Smim17A0A504 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.34□□□□□ -0.11
Smim17A0A504 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim17A0A504 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim17A0A504 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Smim17A0A504 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim17A0A504 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.34□□□□□ -0.11
Smim17A0A504 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smim17A0A504 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Smim17A0A504 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Smim17A0A504 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim17A0A504 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim17A0A504 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Smim17A0A504 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smim17A0A504 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smim17A0A504 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smim17A0A504 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.33□□□□□ -0.11
Smim17A0A504 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Smim17A0A504 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.33□□□□□ -0.12
Smim17A0A504 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smim17A0A504 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smim17A0A504 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Smim17A0A504 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smim17A0A504 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Smim17A0A504 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms