Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap99A0A140LIX9 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap99A0A140LIX9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap99A0A140LIX9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap99A0A140LIX9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap99A0A140LIX9 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap99A0A140LIX9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap99A0A140LIX9 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Cfap99A0A140LIX9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap99A0A140LIX9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cfap99A0A140LIX9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Gm6736-201ENSMUST00000166583 948 ntBASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Gm7507-201ENSMUST00000183053 1008 ntBASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Gm15590-201ENSMUST00000078419 552 ntBASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Cfap99A0A140LIX9 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC18.83■□□□□ 0.61
Cfap99A0A140LIX9 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.83■□□□□ 0.61
Cfap99A0A140LIX9 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.83■□□□□ 0.61
Cfap99A0A140LIX9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cfap99A0A140LIX9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cfap99A0A140LIX9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cfap99A0A140LIX9 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cfap99A0A140LIX9 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Cfap99A0A140LIX9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cfap99A0A140LIX9 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Cfap99A0A140LIX9 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.83■□□□□ 0.61
Cfap99A0A140LIX9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cfap99A0A140LIX9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Cfap99A0A140LIX9 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cfap99A0A140LIX9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cfap99A0A140LIX9 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC18.83■□□□□ 0.6
Cfap99A0A140LIX9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cfap99A0A140LIX9 Gm27702-201ENSMUST00000184512 56 ntBASIC18.83■□□□□ 0.6
Cfap99A0A140LIX9 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.83■□□□□ 0.6
Cfap99A0A140LIX9 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cfap99A0A140LIX9 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cfap99A0A140LIX9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cfap99A0A140LIX9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cfap99A0A140LIX9 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cfap99A0A140LIX9 Gm9889-202ENSMUST00000206983 1577 ntBASIC18.83■□□□□ 0.6
Cfap99A0A140LIX9 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cfap99A0A140LIX9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cfap99A0A140LIX9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cfap99A0A140LIX9 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cfap99A0A140LIX9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cfap99A0A140LIX9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap99A0A140LIX9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap99A0A140LIX9 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap99A0A140LIX9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap99A0A140LIX9 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap99A0A140LIX9 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap99A0A140LIX9 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap99A0A140LIX9 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap99A0A140LIX9 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Cfap99A0A140LIX9 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap99A0A140LIX9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.82■□□□□ 0.6
Cfap99A0A140LIX9 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.82■□□□□ 0.6
Cfap99A0A140LIX9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.82■□□□□ 0.6
Cfap99A0A140LIX9 AV026068-213ENSMUST00000223675 1171 ntBASIC18.82■□□□□ 0.6
Cfap99A0A140LIX9 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap99A0A140LIX9 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap99A0A140LIX9 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap99A0A140LIX9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap99A0A140LIX9 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC18.82■□□□□ 0.6
Cfap99A0A140LIX9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap99A0A140LIX9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap99A0A140LIX9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap99A0A140LIX9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cfap99A0A140LIX9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Cfap99A0A140LIX9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cfap99A0A140LIX9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms