Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atg4a-psA0A0G2JFS9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.17■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Grk6-207ENSMUST00000225925 2769 ntBASIC19.17■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.17■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.17■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Gm8655-201ENSMUST00000221159 852 ntBASIC19.17■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.16■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Gm27459-201ENSMUST00000184860 107 ntBASIC19.16■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.16■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Gm27528-202ENSMUST00000222916 2012 ntBASIC19.16■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Gm5837-201ENSMUST00000191844 1369 ntBASIC19.16■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atg4a-psA0A0G2JFS9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.66
Atg4a-psA0A0G2JFS9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC19.14■□□□□ 0.65
Atg4a-psA0A0G2JFS9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Gm24589-201ENSMUST00000116692 94 ntBASIC19.14■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.14■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.14■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Gm13337-201ENSMUST00000119183 1594 ntBASIC19.14■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.13■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.13■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.13■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Gm11780-201ENSMUST00000136880 516 ntBASIC19.13■□□□□ 0.65
Atg4a-psA0A0G2JFS9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atg4a-psA0A0G2JFS9 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Rbfox2-207ENSMUST00000227533 1041 ntBASIC19.13■□□□□ 0.65
Atg4a-psA0A0G2JFS9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Atg4a-psA0A0G2JFS9 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms