Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav18A0A075B656 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav18A0A075B656 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav18A0A075B656 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav18A0A075B656 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav18A0A075B656 Wnt10b-206ENSMUST00000228546 2709 ntBASIC12.96□□□□□ -0.33
Trav18A0A075B656 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav18A0A075B656 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.96□□□□□ -0.33
Trav18A0A075B656 Gm6433-201ENSMUST00000118634 875 ntBASIC12.96□□□□□ -0.33
Trav18A0A075B656 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav18A0A075B656 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav18A0A075B656 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Trav18A0A075B656 CT009713.7-201ENSMUST00000224689 571 ntBASIC12.96□□□□□ -0.33
Trav18A0A075B656 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav18A0A075B656 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav18A0A075B656 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav18A0A075B656 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav18A0A075B656 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav18A0A075B656 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav18A0A075B656 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav18A0A075B656 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav18A0A075B656 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC12.96□□□□□ -0.34
Trav18A0A075B656 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Trav18A0A075B656 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav18A0A075B656 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.96□□□□□ -0.34
Trav18A0A075B656 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav18A0A075B656 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav18A0A075B656 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Trav18A0A075B656 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav18A0A075B656 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav18A0A075B656 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Trav18A0A075B656 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Mir770-201ENSMUST00000103252 94 ntBASIC12.94□□□□□ -0.34
Trav18A0A075B656 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Gm10252-201ENSMUST00000209541 832 ntBASIC12.94□□□□□ -0.34
Trav18A0A075B656 Gm18032-201ENSMUST00000222541 538 ntBASIC12.94□□□□□ -0.34
Trav18A0A075B656 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav18A0A075B656 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav18A0A075B656 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms