Protein–RNA interactions for Protein: A0A075B647

Trav9-2, T cell receptor alpha variable 9-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-2A0A075B647 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9-2A0A075B647 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC11.87□□□□□ -0.51
Trav9-2A0A075B647 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trav9-2A0A075B647 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Ntrk2-205ENSMUST00000224402 2284 ntBASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Rbfox2-206ENSMUST00000227314 1810 ntBASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav9-2A0A075B647 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Gm25406-201ENSMUST00000157599 105 ntBASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Gm25745-201ENSMUST00000174945 133 ntBASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav9-2A0A075B647 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-2A0A075B647 Gm19430-201ENSMUST00000193847 2137 ntBASIC11.84□□□□□ -0.51
Trav9-2A0A075B647 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-2A0A075B647 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-2A0A075B647 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-2A0A075B647 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-2A0A075B647 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-2A0A075B647 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-2A0A075B647 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trav9-2A0A075B647 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-2A0A075B647 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-2A0A075B647 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-2A0A075B647 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-2A0A075B647 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-2A0A075B647 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav9-2A0A075B647 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-2A0A075B647 Gm12644-201ENSMUST00000119935 606 ntBASIC11.84□□□□□ -0.51
Trav9-2A0A075B647 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav9-2A0A075B647 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trav9-2A0A075B647 Gm8349-201ENSMUST00000182720 1003 ntBASIC11.84□□□□□ -0.51
Trav9-2A0A075B647 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav9-2A0A075B647 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-2A0A075B647 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav9-2A0A075B647 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav9-2A0A075B647 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.84□□□□□ -0.51
Trav9-2A0A075B647 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms