Protein–RNA interactions for Protein: Q9Z1X9

Cdc45, Cell division control protein 45 homolog, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc45Q9Z1X9 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdc45Q9Z1X9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdc45Q9Z1X9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdc45Q9Z1X9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
Cdc45Q9Z1X9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdc45Q9Z1X9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.42■□□□□ 0.54
Cdc45Q9Z1X9 Gm25406-201ENSMUST00000157599 105 ntBASIC18.42■□□□□ 0.54
Cdc45Q9Z1X9 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cdc45Q9Z1X9 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.42■□□□□ 0.54
Cdc45Q9Z1X9 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.42■□□□□ 0.54
Cdc45Q9Z1X9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdc45Q9Z1X9 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.42■□□□□ 0.54
Cdc45Q9Z1X9 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdc45Q9Z1X9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdc45Q9Z1X9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdc45Q9Z1X9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdc45Q9Z1X9 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdc45Q9Z1X9 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdc45Q9Z1X9 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdc45Q9Z1X9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdc45Q9Z1X9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdc45Q9Z1X9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdc45Q9Z1X9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdc45Q9Z1X9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdc45Q9Z1X9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
Cdc45Q9Z1X9 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdc45Q9Z1X9 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.41■□□□□ 0.54
Cdc45Q9Z1X9 Gm18669-201ENSMUST00000216049 778 ntBASIC18.41■□□□□ 0.54
Cdc45Q9Z1X9 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdc45Q9Z1X9 Gm7367-201ENSMUST00000057611 492 ntBASIC18.41■□□□□ 0.54
Cdc45Q9Z1X9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdc45Q9Z1X9 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC18.4■□□□□ 0.54
Cdc45Q9Z1X9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cdc45Q9Z1X9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Cdc45Q9Z1X9 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc45Q9Z1X9 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc45Q9Z1X9 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc45Q9Z1X9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc45Q9Z1X9 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Cdc45Q9Z1X9 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.4■□□□□ 0.54
Cdc45Q9Z1X9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc45Q9Z1X9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc45Q9Z1X9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc45Q9Z1X9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Cdc45Q9Z1X9 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cdc45Q9Z1X9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc45Q9Z1X9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cdc45Q9Z1X9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc45Q9Z1X9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Cdc45Q9Z1X9 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc45Q9Z1X9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc45Q9Z1X9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc45Q9Z1X9 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc45Q9Z1X9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdc45Q9Z1X9 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cdc45Q9Z1X9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cdc45Q9Z1X9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Cdc45Q9Z1X9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc45Q9Z1X9 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC18.39■□□□□ 0.53
Cdc45Q9Z1X9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc45Q9Z1X9 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.39■□□□□ 0.53
Cdc45Q9Z1X9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc45Q9Z1X9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc45Q9Z1X9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc45Q9Z1X9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc45Q9Z1X9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc45Q9Z1X9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc45Q9Z1X9 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cdc45Q9Z1X9 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdc45Q9Z1X9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.38■□□□□ 0.53
Cdc45Q9Z1X9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdc45Q9Z1X9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdc45Q9Z1X9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdc45Q9Z1X9 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdc45Q9Z1X9 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdc45Q9Z1X9 Gm12895-201ENSMUST00000122214 226 ntBASIC18.38■□□□□ 0.53
Cdc45Q9Z1X9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.38■□□□□ 0.53
Cdc45Q9Z1X9 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Cdc45Q9Z1X9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.38■□□□□ 0.53
Cdc45Q9Z1X9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdc45Q9Z1X9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdc45Q9Z1X9 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Cdc45Q9Z1X9 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdc45Q9Z1X9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdc45Q9Z1X9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdc45Q9Z1X9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cdc45Q9Z1X9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdc45Q9Z1X9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdc45Q9Z1X9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdc45Q9Z1X9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdc45Q9Z1X9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Cdc45Q9Z1X9 Gm15165-201ENSMUST00000118140 502 ntBASIC18.37■□□□□ 0.53
Cdc45Q9Z1X9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdc45Q9Z1X9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.37■□□□□ 0.53
Cdc45Q9Z1X9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdc45Q9Z1X9 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdc45Q9Z1X9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdc45Q9Z1X9 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdc45Q9Z1X9 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdc45Q9Z1X9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms