Protein–RNA interactions for Protein: Q9Z1P4

Lgr5, Leucine-rich repeat-containing G-protein coupled receptor 5, mousemouse

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgr5Q9Z1P4 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lgr5Q9Z1P4 Mir6956-201ENSMUST00000183598 62 ntBASIC18.83■□□□□ 0.6
Lgr5Q9Z1P4 Gm7063-201ENSMUST00000186840 981 ntBASIC18.83■□□□□ 0.6
Lgr5Q9Z1P4 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lgr5Q9Z1P4 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lgr5Q9Z1P4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lgr5Q9Z1P4 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Lgr5Q9Z1P4 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.83■□□□□ 0.6
Lgr5Q9Z1P4 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lgr5Q9Z1P4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Lgr5Q9Z1P4 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lgr5Q9Z1P4 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lgr5Q9Z1P4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lgr5Q9Z1P4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lgr5Q9Z1P4 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lgr5Q9Z1P4 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.82■□□□□ 0.6
Lgr5Q9Z1P4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC18.82■□□□□ 0.6
Lgr5Q9Z1P4 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.82■□□□□ 0.6
Lgr5Q9Z1P4 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.82■□□□□ 0.6
Lgr5Q9Z1P4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Lgr5Q9Z1P4 Rpph1-201ENSMUST00000175096 319 ntBASIC18.82■□□□□ 0.6
Lgr5Q9Z1P4 Gm37171-201ENSMUST00000192636 1185 ntBASIC18.82■□□□□ 0.6
Lgr5Q9Z1P4 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.82■□□□□ 0.6
Lgr5Q9Z1P4 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lgr5Q9Z1P4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lgr5Q9Z1P4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lgr5Q9Z1P4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lgr5Q9Z1P4 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Lgr5Q9Z1P4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lgr5Q9Z1P4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Lgr5Q9Z1P4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lgr5Q9Z1P4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lgr5Q9Z1P4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lgr5Q9Z1P4 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.81■□□□□ 0.6
Lgr5Q9Z1P4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC18.81■□□□□ 0.6
Lgr5Q9Z1P4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lgr5Q9Z1P4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lgr5Q9Z1P4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lgr5Q9Z1P4 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lgr5Q9Z1P4 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lgr5Q9Z1P4 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC18.81■□□□□ 0.6
Lgr5Q9Z1P4 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC18.81■□□□□ 0.6
Lgr5Q9Z1P4 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Lgr5Q9Z1P4 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.81■□□□□ 0.6
Lgr5Q9Z1P4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lgr5Q9Z1P4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lgr5Q9Z1P4 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.81■□□□□ 0.6
Lgr5Q9Z1P4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lgr5Q9Z1P4 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Lgr5Q9Z1P4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lgr5Q9Z1P4 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lgr5Q9Z1P4 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lgr5Q9Z1P4 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lgr5Q9Z1P4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lgr5Q9Z1P4 Gm16198-201ENSMUST00000118766 670 ntBASIC18.8■□□□□ 0.6
Lgr5Q9Z1P4 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.8■□□□□ 0.6
Lgr5Q9Z1P4 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.8■□□□□ 0.6
Lgr5Q9Z1P4 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lgr5Q9Z1P4 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lgr5Q9Z1P4 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lgr5Q9Z1P4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lgr5Q9Z1P4 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lgr5Q9Z1P4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lgr5Q9Z1P4 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lgr5Q9Z1P4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lgr5Q9Z1P4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lgr5Q9Z1P4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Lgr5Q9Z1P4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lgr5Q9Z1P4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Lgr5Q9Z1P4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Lgr5Q9Z1P4 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lgr5Q9Z1P4 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.79■□□□□ 0.6
Lgr5Q9Z1P4 Gm8318-201ENSMUST00000182954 872 ntBASIC18.79■□□□□ 0.6
Lgr5Q9Z1P4 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.79■□□□□ 0.6
Lgr5Q9Z1P4 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lgr5Q9Z1P4 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Lgr5Q9Z1P4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lgr5Q9Z1P4 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lgr5Q9Z1P4 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18.79■□□□□ 0.6
Lgr5Q9Z1P4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lgr5Q9Z1P4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lgr5Q9Z1P4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Lgr5Q9Z1P4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lgr5Q9Z1P4 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Lgr5Q9Z1P4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lgr5Q9Z1P4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Lgr5Q9Z1P4 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Lgr5Q9Z1P4 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.78■□□□□ 0.6
Lgr5Q9Z1P4 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lgr5Q9Z1P4 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.78■□□□□ 0.6
Lgr5Q9Z1P4 Gm44872-201ENSMUST00000207864 420 ntBASIC18.78■□□□□ 0.6
Lgr5Q9Z1P4 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.78■□□□□ 0.6
Lgr5Q9Z1P4 Gm5628-201ENSMUST00000222318 1049 ntBASIC18.78■□□□□ 0.6
Lgr5Q9Z1P4 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lgr5Q9Z1P4 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lgr5Q9Z1P4 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Lgr5Q9Z1P4 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lgr5Q9Z1P4 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lgr5Q9Z1P4 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lgr5Q9Z1P4 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms