Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Lima1Q9ERG0 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Lima1Q9ERG0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Lima1Q9ERG0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lima1Q9ERG0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lima1Q9ERG0 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lima1Q9ERG0 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lima1Q9ERG0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lima1Q9ERG0 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lima1Q9ERG0 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.64■□□□□ 0.09
Lima1Q9ERG0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lima1Q9ERG0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lima1Q9ERG0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lima1Q9ERG0 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.64■□□□□ 0.09
Lima1Q9ERG0 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.64■□□□□ 0.09
Lima1Q9ERG0 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.64■□□□□ 0.09
Lima1Q9ERG0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC15.64■□□□□ 0.09
Lima1Q9ERG0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Lima1Q9ERG0 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lima1Q9ERG0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lima1Q9ERG0 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lima1Q9ERG0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Lima1Q9ERG0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Lima1Q9ERG0 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lima1Q9ERG0 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.64■□□□□ 0.09
Lima1Q9ERG0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lima1Q9ERG0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Lima1Q9ERG0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 BC037039-201ENSMUST00000192003 2205 ntBASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lima1Q9ERG0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lima1Q9ERG0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lima1Q9ERG0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Lima1Q9ERG0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lima1Q9ERG0 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.62■□□□□ 0.09
Lima1Q9ERG0 Gm44450-201ENSMUST00000199528 114 ntBASIC15.62■□□□□ 0.09
Lima1Q9ERG0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.62■□□□□ 0.09
Lima1Q9ERG0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Lima1Q9ERG0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lima1Q9ERG0 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lima1Q9ERG0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC15.62■□□□□ 0.09
Lima1Q9ERG0 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms